Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AFSEVVRNKDDRACLPGCTDMECCGKSFRAMALAERGNGRRTAEQLAEDKKLLEDYLGEEAHRLFSMTKEERDELWLEAKTKELANRIGKHRHRFSRMKTPPGFWRTDFPD |
1 | 1gakA | 0.12 | 0.07 | 0.61 | 0.68 | DisCoVER | | VVVEQ---------SYVQRGMV-NF--LDEEMHKLVKRFRD------------------------------LGPGFVFLLKKVNRERMCMDYARYSKKTLTKMGRFVGYP- |
2 | 3bpwA | 0.05 | 0.05 | 0.86 | 0.83 | DEthreader | | -PRGSMGFK-VKLERRCL----CI--GL-D-PDEKDNFKNENNNNIKKNLKE-KYINNVKKDILKIEEEFFYFFNHFCFYIINETNKYALT---YELN-PTFKSDSCTAFG |
3 | 2crpA | 0.11 | 0.11 | 1.00 | 0.52 | CEthreader | | SLDKLLQNNYGLASFKSLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELISGPSSG |
4 | 5yx4A | 0.10 | 0.10 | 0.98 | 0.62 | EigenThreader | | AHSQADAAVSALAKKWAASDAAFFRDVVTGFTQVTMILPLTGAQYSEKVTENCVAYWKAVAAAVDKF--KEAFKPLCEAVLEAIIGAKLSLATRVAELLKEAASVDEPAAA |
5 | 7a23m | 0.25 | 0.12 | 0.48 | 0.34 | HHpred | | -----------------------------------------------------MEFAENLV--LRLMNPEERDR-KAREHIYEMHERCKKIKEMWALPIRPYGFWTFER-- |
6 | 5gmkc | 0.20 | 0.17 | 0.87 | 0.47 | MRFsearch | | --------KEEDAQLLDLAPAQVCVERYNRLL------EDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIVYEQAPMPGIYDTSTED |
7 | 3kdwA1 | 0.15 | 0.11 | 0.74 | 0.49 | FFAS-3D | | AYVESIVKRSQKDKL-ELTDTVAARNRYFKLNDI--------YETRDAKVKLAKETLTGDAKQEAVKAAEAEKDAALYRTHFAFPADLSLY-------------------- |
8 | 6v9iC1 | 0.07 | 0.06 | 0.92 | 0.71 | SPARKS-K | | DKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITL--------- |
9 | 4ka7A | 0.13 | 0.08 | 0.60 | 0.42 | CNFpred | | ---------------------GQSKPIYNAFKAIRES----WSSLSEARQRLVEAQIKEAVLIGIALDDEKREEFNIEQELEKLSHKFSENV------------------- |
10 | 2a3vB2 | 0.03 | 0.03 | 0.86 | 0.83 | DEthreader | | --VLTRDERRLLEVHQLKLGLKLHLKEQIALAKRYYDRDLHQKNYG--GV--WL-----PTALKEKYPN-APERW-H--YLFHM-EVLAVTCTLRHSYTHVDRGASVLSSR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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