Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TYEYYGFVLYLFSSLSFLIYLLWSYLPSPFLHALGLHYYPNRWWSLALPAFLVMLLLYIYVALACYNTAYLTLPLASLETIVDSAAHLALLDRSSRQKKERTLDAWREVWASPTDAVMDIPLGGVCEVLY |
1 | 4qndA | 0.06 | 0.03 | 0.54 | 0.54 | DisCoVER | | ---------------------------------------------------SPLATMPQLYKLYVSHSEHAL------GLSLTTWLYSFALLWTIYGIYHKNPTIWVGN--CLGFLMYVAMVVGIIAHT- |
2 | 5cjzA | 0.06 | 0.05 | 0.92 | 0.83 | DEthreader | | RRATSTIAKAVKARLLLYAASLWNGSFPYPNWQ--ALVSN-TY-DKSKWERALAACQEALTLATTDREL-YDDDEKNMK--MR--AVSGLNQFDFYSRYGYGTFVDVSGTSAPTILFRLAE-YLAIDANP |
3 | 3ug9A | 0.06 | 0.05 | 0.98 | 0.51 | CEthreader | | GLANDYNKRTMGLLVSDIGTIVWGTTAALS---KGYVRVIFFLMGLCYGIYTFFNAAKVYIEAYHTVPKGRCRQVVTGMAWLFFVSWGMFPILFILGPEGFGVLSVYGSTVGHTIIDLMSKNCWGLLGHY |
4 | 7c2eR2 | 0.09 | 0.08 | 0.99 | 0.52 | EigenThreader | | PEEQLLFLYIIYTVGYALSFSALVIA-SAILLGFRHLHLNLFASFILRALSVFIKDAAQQHQWDGLLSYQDSANYYWLLVEGVYLYTLLAWTRNSNMNYWLIIRLPILFAIGVNFLIFVRVICIVVSKLK |
5 | 2pffB | 0.10 | 0.10 | 0.98 | 0.30 | HHpred | | -DKDYLISCPLIGVIQLAHYVVTAKFTPGELRSLGATGHSQGLVTAVVSVRKAITVLFFIGVRCYEAY-PNTSLPPSILSLENNEGVPSPMLSISNLEQTNSHLPAKQVEISLVNGAKNLVPQSLNLTL- |
6 | 4m48A | 0.20 | 0.13 | 0.64 | 0.27 | MRFsearch | | --RYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRPGRYWQVCWRFVAPIFLLFITVYLLINALGWCIAGS--------------------------------------------SVVMIPAVAIFKLL- |
7 | 4jq6A | 0.15 | 0.08 | 0.52 | 0.47 | FFAS-3D | | --KTSLTVAGLVTGVAFWHYLYMR----GVWIYAGETPTVFRYWLITVPLQIIEFYLILVMLIGGFIGEAGLGD-------------------------------------------------------- |
8 | 1xmeA2 | 0.07 | 0.06 | 0.88 | 0.78 | SPARKS-K | | VHNTAWVPGHFHLQVALVTLTAMGSLYWLLPNLTGKP-ISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLLNV--------------PRRAYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFS |
9 | 5oqtA | 0.10 | 0.05 | 0.53 | 0.85 | CNFpred | | -----VLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGY-------------------------------------------------------- |
10 | 1p49A | 0.09 | 0.07 | 0.76 | 0.83 | DEthreader | | VFTTGFKRVFLPLQIVGVTLLTLAALNLGLL-------HVP-LGVFFSLLFLAALILTLFLGFHYFRPLNCFMMIIQ-YLRLTSEWSVGQILDATLLRWVIQM-LEGKS--------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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