Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LVLAFGASELMDDPTPLRELRRAYPRAHFAGCSSAGEIIGTSVRDHTLSVAVARFEKTSLASTYVEVAKMSDSFSAGQQLARKLQRPDLRGVLVLSEGLGVNGSELVRGINSVLPDSVVVTGGLSGDGPRFKRTWVCAGDKIRSGIVTAVAFHGDHIVINHGSKGGWDKFGPERTITKSDANVLYELDGK |
1 | 2btuA1 | 0.07 | 0.05 | 0.64 | 0.78 | DisCoVER | | -HVQTTMRKE--------------------------VLGGFGGMFDLSKFAL-EEPVLVSGTDGVLAFMADKHDTIGIDAVAMCVIVEPLFFLDYIACGKAKIENIVKGISEGC-AGCALIGETAEMP-GM--YST------EEYDLAGFTVGIVDK------------KKI------------------ |
2 | 5hweA | 0.11 | 0.09 | 0.85 | 1.00 | DEthreader | | VVIGKTRIIAD-R-AFREVLSAKGNR-EVPIVWS-GGTDGVIS----PHATIFATVRLTVGVAMSEQLLEDAMITKVAAAVKDMAITDDVHYVQTKTPLLLSNGGTALGIAVALGE-SSVASCSSG-------VE--------LDRAQIVVVGNARIGHSVMKDPIAISLVN-----VHWHQIKSCGAAP |
3 | 1rluA2 | 0.10 | 0.07 | 0.71 | 0.92 | CEthreader | | ------GDAAVSLMDAFRSADEVL--LNGVQGITDLITTPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEGAQGVLMSIAGGSFEINEAASLVQDAAHPDANIIFGTVIDDSLGD-----------EVRVTVIAAGF------------------------------------ |
4 | 2r6r1 | 0.11 | 0.09 | 0.83 | 0.83 | EigenThreader | | IKVIGVGGGGSN--AVNRMYEDGIEGVELYAINTDAGLGGGTGTGAAPTVAVATLPEGGSIIGMGEGRGDEKADIAVEKAVTSPLIEGARRLLVTIDIPYDIVDEVMERIHSKVHPEAEIIFGALEPQEQD-------------FIRVAIVATDFPE---------------EKFQVG---EKEVKFKVI |
5 | 5wb4A | 0.13 | 0.06 | 0.46 | 0.28 | HHpred | | -IYLLGAAA-QVAEQARANLEKLYPGVKIVGTHHG-YFT-----------------E-------------EEE----NKIIEEINNKGAEVLFVALGA--PKQEKWIYKNKDKLK--VKIA-GVGGSFD------------------------------------------------------------- |
6 | 1w59A | 0.18 | 0.12 | 0.68 | 0.40 | MRFsearch | | ----------EAAKESAEEIKAAIQDMVFITCGLGGVVAEISKKIGALTVAVVTLPFGLAMIGIGESD---SEKRAKEAVSMALNIDGATGALIHVMGTLEEAREVVATVSSRLDPNATIIWGATID------------ENLENTVRVLLVITG------------------------------------ |
7 | 1wduB | 0.13 | 0.12 | 0.90 | 0.50 | FFAS-3D | | VLQANLQRKKLATAELAIEAATR--KAAIALIQEPYVIQYPQLTTNNIVVVGIRTRAWEITLVSYYFEPDKPIESYLEQIKRVERKMGPKRLIFGGDEDDARGDQLMGTLGEL---------GLHILNEGDVPTFDTIRGGKRYQSRVDVTFCTEDM------LDLIDGWRVDEDLVSSDHNGMVNIR-- |
8 | 3gxbA | 0.10 | 0.08 | 0.83 | 0.50 | SPARKS-K | | VAFVLEGSDKIGFNRSKEFMEEVIQRM--------------DVGQDSIHVTVLQYSYM---VTVEYPFSEAQSK---GDILQRVREIRYQ------GGNRTNTGLALRYLSDHSFLVSNLVYMVTGNPASDEI------KRLPGDIQVVPIGVGPNANVQELERIGWPNAPILIQDFETLPREAPDLVLQ |
9 | 4xylA | 0.11 | 0.08 | 0.76 | 0.73 | CNFpred | | FAVVITSFKEVGNEELEEELVRRAYGMRVLGPNIFGYLYA----PARLNATFGPKDVLSGNVAFISQS-----GALGIALMGYTVVENIGISSIVSVGNKLDDVDLLDFFDKDP--NTGVIMIYLEGIAPRGRMFIDVASRVSLRKPIIVIKAGR----------------------------------- |
10 | 5t13A | 0.11 | 0.08 | 0.79 | 1.00 | DEthreader | | VCVLGTRGYTTLAKVYFSEKL------RIAFIMSGG-TEGVMA----PHCTIFTVKRLAVQQIFTREFLPEPQVTETADAVRRAMRADDVHFVQVKCPLLYSRGASALGIALALGE-SSVASTSAG------IE---------LMNNEIIVMGNSVIGHAFAKA-EAS-EVRRHTML---SE-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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