>PF08475 (185 residues) LMLAIFLIIAFTLMYLAIYFEFDETTFTKRLQVMTEYVKRTNADEPTPDVIGYVSDIMQN TYIVTWFNTVDLSTYHESVHDDQIEIFDFLNQKFQIVDRIVHDRVRANDKNLNEFILSGD KDDVTMKCPAYFNFDYAQLKCVPVPPCDNKSAGLYPMDERLLDTLVLNQHLDKDYSSNMH LYHPT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LMLAIFLIIAFTLMYLAIYFEFDETTFTKRLQVMTEYVKRTNADEPTPDVIGYVSDIMQNTYIVTWFNTVDLSTYHESVHDDQIEIFDFLNQKFQIVDRIVHDRVRANDKNLNEFILSGDKDDVTMKCPAYFNFDYAQLKCVPVPPCDNKSAGLYPMDERLLDTLVLNQHLDKDYSSNMHLYHPT | |||||||||||||||||||
1 | 5yy8A2 | 0.09 | 0.04 | 0.44 | 0.68 | DisCoVER | -----R-CNA--GV--CA--L--------------------------NGKLYIVG-GSGL-KNCDVFDPV-TKLWTSCAP------L---------N--IRRHQSAVCEGGYLYIIGGAESCLNTVERYNPE---NNTWTLI------------------------------------------- | |||||||||||||
2 | 6elhA | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | ------------------YAPILAGQSAWQGGMEVGSAYQAPDDYTYALTTWQIWIAGFLTALVVSYNFFALNFG-----------LDLGRQLLMVLLMVGVFWVGEVTLAAIFMGVTLHHLGFSLEVVPLVLL--FVVANMIGAFGLIIQGLNTSA--VHAHAALFGV-Y-GFLALGFV----- | |||||||||||||
3 | 6ww7A | 0.08 | 0.08 | 0.98 | 0.61 | CEthreader | LQESVRYIAVLKKTTLALHHLSSGHLKWVEHLPESDSIHYQMVYSYGSGVVWALGVVPFSHVNIVKFNVEDGEIVQQVRVSTPWLQHLSGACGVVDEAVL----VCPDPSSRSLQTLALETEWELRQIPLQSLDLEFGSGFQPRVLPTQPNPVDASRAQFFLHLSPSHYALLQYHYGTLSLLKNF | |||||||||||||
4 | 2gafD | 0.06 | 0.05 | 0.93 | 0.62 | EigenThreader | MEELARDMLNSMNKNVNKLMEEYLRRHTFLIDLAFLIKFIT----GNNIILSKIP---YLRNYMVIKDENDNHIIDSFN-IRPKIFID---NIYIVDNNMPMKCIIDE--NNRIVTVTTKDFKKCLVYLTNSVYLIDNIMYTYFSNTILDKGKVHEISARGLCAHILLYQMLTSGEYKQCLSDLL | |||||||||||||
5 | 3u02A | 0.13 | 0.08 | 0.64 | 0.30 | HHpred | ----------------VFLIGEVLEEFSLRIEEAEHVARKVNAEVYKFAAIGY--PLEKFTYELLAYRKREYWGTPRRVIKESVFYADSYPFTYDNVDPYRTVLITPHGKDPVLVGIRGIDVGKILQVFEEEPIEFF------------------------------------------------ | |||||||||||||
6 | 5k7lA3 | 0.15 | 0.03 | 0.22 | 0.38 | MRFsearch | --FAVAIMMIGSLLYATIFGNVNTNRYHEMLNSVRDFLKLYQ----------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 1dqcA | 0.11 | 0.04 | 0.38 | 0.41 | FFAS-3D | ----------------------------------------------------------------------------------------YLAFRCGRYSPCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKCTSVN-KECHLWKT------------------------- | |||||||||||||
8 | 1ftpA | 0.08 | 0.05 | 0.65 | 0.68 | SPARKS-K | -----------------VKEFAGIKYKLDSQTNFEEYMKAIGGLALSP--VIELEILDGDKFKLTSKT--AIKNTEFTFKLGEEFDEETLDRKVKSTDGPNKLVHEQKGDHPTIIIREFSKEQCVITIKLGDL------VATRIYKAQ------------------------------------- | |||||||||||||
9 | 3bc9A | 0.13 | 0.09 | 0.64 | 0.62 | CNFpred | QAYAYILTRA-TVYWKDYYIWEMKEGLDKLLTARRYYAYGPGYEVNDADIYSYVRSGFDGLVLMISDGTGNVAGKWINSRQPDTEFYDLTGHIK--------EHVTTDS--EGYGNFKVIKGWSIWVPVE------------------------------------------------------- | |||||||||||||
10 | 1kb0A | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | AQAAAQGKLDAKEVW-HQ--NTF-SLTIT--GAP--RV--F------KGKVIIGNGGAGVRGYITAYDAETGERKWRWFSVGGTMDSMTFDMYAHYQETPGDNWDWAAD--KPQDAGPYGHNNVPVNL-----MDDKAKFFNA------YDPAKV-AG-TMLYVACVFHGVPGVDRGYMDAIENL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |