Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GPNTSPRDVPHFSECKPDNVNPGHEIVKFYLFYERWRCAEVEDTDPCMENLKVDYHPAGVFVHPSGVERSLHDCINAMRSCYGDKQGRKFQVWVDRVSPVQMSSDTWIVKFDKWELSGDERHCCITTVVLSSK |
1 | 1tp6A | 0.18 | 0.15 | 0.83 | 1.17 | DEthreader | | ------------------CA-YRREIHHAHVAIRDWLAGDSR-AD-ALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRP--GLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
2 | 1tp6A | 0.18 | 0.15 | 0.83 | 1.17 | DEthreader | | -C------------------AYRREIHHAHVAIRDWLAGDSR-AD-ALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTR--PGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
3 | 1tp6A | 0.18 | 0.15 | 0.83 | 2.55 | HHpred | | -------------------CAYRREIHHAHVAIRDWLAGDSR--ADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPG--LRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
4 | 1tp6A | 0.18 | 0.14 | 0.81 | 1.09 | DisCoVER | | --------------------AYRREIHHAHVAIRDWLAGDSRA--DALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTR--PGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHR- |
5 | 1tp6A | 0.18 | 0.14 | 0.81 | 0.60 | MRFsearch | | ---------------------YRREIHHAHVAIRDWLAGDS--RADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTR--PGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
6 | 1tp6A | 0.18 | 0.15 | 0.83 | 1.79 | SPARKS-K | | -------------------CAYRREIHHAHVAIRDWLAGDSRA--DALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPG--LRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
7 | 1tp6A | 0.18 | 0.14 | 0.81 | 0.82 | MAPalign | | --------------------AYRREIHHAHVAIRDWLAGDSR--ADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTR--PGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHR- |
8 | 1tp6A | 0.17 | 0.14 | 0.83 | 0.69 | CEthreader | | -------------------CAYRREIHHAHVAIRDWLAGDSR--ADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRP--GLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
9 | 1tp6A | 0.19 | 0.15 | 0.81 | 1.60 | FFAS-3D | | ---------------------YRREIHHAHVAIRDWLAGDSRADA--LDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPG--LRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRD |
10 | 1tp6A | 0.15 | 0.13 | 0.83 | 1.00 | DEthreader | | -------------------CAYRREIHHAHVAIRDWLAGDSR-AD-ALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTR-P-GLRIEIDGESLLASGVDGATLAYREIQSDAGRSERLSTVVLHRDD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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