Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | HIFTPEERRYVNVHFIIARLSNGDSTVDEDLLDIIRTKSKEFTQLFKVLKESSIEWIYEHHKNFSPIDDESGWTSLISRAIDMNSKPREIIHVAEGQNIWYSHSNRLITIYRGFKTEDGKIYDTDGNFIQNMPDNPIIKIHNDKLVYL |
1 | 6rflY | 0.63 | 0.61 | 0.97 | 6.71 | HHpred | | HVLTPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQLFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSKKNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDM-----IKIHDGKLIYI |
2 | 6rflY3 | 0.48 | 0.16 | 0.34 | 1.16 | DisCoVER | | -------------------------------------------------------------------------------------------KLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDMIKIGKLIYI------- |
3 | 6rflY | 0.63 | 0.59 | 0.95 | 2.00 | MRFsearch | | ---TPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQLFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSKKNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLH-----DMIKIHDGKLIYI |
4 | 6rflY | 0.62 | 0.60 | 0.97 | 1.63 | SPARKS-K | | HVLTPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQLFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSKKNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDMI-----KIHDGKLIYI |
5 | 6rflY | 0.62 | 0.59 | 0.96 | 1.38 | FFAS-3D | | -VLTPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQLFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSKKNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLH-----DMIKIHDGKLIYI |
6 | 6rflY3 | 0.54 | 0.21 | 0.39 | 2.59 | HHpred | | --------------------------------------------------------------------------------------KNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDM-----IKIHDGKLIYI |
7 | 5mrwB | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | | ETLVVQALEAVLNQWNPV--------FI--VWIGSLTISGWLWITVLFANFAEALAEGR-SKAQANSK--AEGAQ--RRKTPNEIALTILLITLIPTTILLIMLMTRGLT--S-NAKAIAVIFNA-LIIVFLIPLAL----------- |
8 | 2ebsB | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | | GDIDMN-MG-N----ARYK----D-GT--PV-PWLDFNNGYGAPHTKFGWWMSVMYGIWALQIDGIEENAILGIGNISSSSGH----CARGMNHGSTIAVDA-----SGSQIVWSTLQGPWYSGKTWSVPALKATNVLSDKV-DGTFS |
9 | 6rflY3 | 0.55 | 0.20 | 0.37 | 0.82 | MRFsearch | | ----------------------------------------------------------------------------------------ITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLH-----DMIKIHDGKLIYI |
10 | 6rflY3 | 0.53 | 0.20 | 0.39 | 0.79 | SPARKS-K | | --------------------------------------------------------------------------------------KNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDMI-----KIHDGKLIYI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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