>PF08467 (339 residues) MFFEILIGASAKAVKDFISHCYSRLKSIYYSFKRWLMEISGQFKAHDAFVNMCFGHMADI EDFEAELAEEFAEREDEVEEARSLLKLLVAQKSKSGVTEAWTDFFTKSRGGVYAPLSCEP TRQELEVKSEKLERLLEEQHQFEVRAAKKYIKEKGRGFINCWNDLRSRLRLVKDVKDEAK DNARAAAKIGAEMFAPVDVQDLYSFTEVKKVETGLMKEVVKEKNGEEEKHLEPIMEEVRS IKDTAEARDAASTWITETVKLKNATLNADELSLATIARYVENVGDKFKLDIASKTYLKQV ASMSVPIPTNKDIKLKMVLQSPEARARRERMDVLDSVGF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MFFEILIGASAKAVKDFISHCYSRLKSIYYSFKRWLMEISGQFKAHDAFVNMCFGHMADIEDFEAELAEEFAEREDEVEEARSLLKLLVAQKSKSGVTEAWTDFFTKSRGGVYAPLSCEPTRQELEVKSEKLERLLEEQHQFEVRAAKKYIKEKGRGFINCWNDLRSRLRLVKDVKDEAKDNARAAAKIGAEMFAPVDVQDLYSFTEVKKVETGLMKEVVKEKNGEEEKHLEPIMEEVRSIKDTAEARDAASTWITETVKLKNATLNADELSLATIARYVENVGDKFKLDIASKTYLKQVASMSVPIPTNKDIKLKMVLQSPEARARRERMDVLDSVGF | |||||||||||||||||||
1 | 2pffB | 0.04 | 0.03 | 0.70 | 0.74 | DisCoVER | GGGGGGG--GG--G---G--GG--GG-GGGGG------G------------GGGGGGGGGG--GG--G--GGGGGGGG-GGG-GG-GGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------G--GG--GG--GGGGGGGGGGGGGGGGGGGG--GGGGGGGG-------------------------GGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGG-GGGGGGGGG- | |||||||||||||
2 | 2cqtA | 0.06 | 0.04 | 0.70 | 0.67 | DEthreader | -------------FYRDAKMRRLTRYRYADAGGYTSWLVKADLDH-FE--AR-HGLGYSRTLFQKVTVTATLFSF--VE-FCL-NAQDDQTNY--QRNLSIGEVEVESAIYH-KTEYRE----------TDRDTFVGANSLGEASVPRAGKS-ADSVAYPIGSHVYVLGLLRFAQVAALEALNSYWTLLSRVNIWNQQCLGFVHLIPERAER-IDIAGVAAYIKESGDWGIEPV-DN--DWNDEIFCHNNPITPARELEPYV-------EAKNSW-LT-GTAAW-FV---------------------------------------------------- | |||||||||||||
3 | 6g3dA | 0.09 | 0.09 | 1.00 | 0.82 | CEthreader | PEFQELYDFDAAALTLTSAVFPYDSQIHRAHVVMLTEQGILTVEESATILSGLAQVDELSRNDLANAGKRMFLRDQLLRTIEAVIGYREAVVHKAADHLDTVMVVYTQRKEAQPITLGHYLMAISENLAKNLDRYRELYARINLCLNRDRTSALLGFDGLVVNSIEGVAGWDHVAEHAFVNAVFLSGLSRLASEIQKNPDSLERSRKAAFAAMGPLVGILTSLNAIEYQYSAARVELEPRSIDALIAATHAMTGVVRTLHPNKERRQYAAENYSTMTDLTDMLVRRVGIDYREAHEIVAHVVITAIEKGIKANKIGLDLVQEAAVAQTGAGINVSADDI | |||||||||||||
4 | 5tj5A | 0.05 | 0.04 | 0.83 | 0.73 | EigenThreader | --------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAQYVTFPFMFAIMFGHGFLMTLAALSLVLNILLMGVFSMYTGFLYNLFSNSYKMKLSILMGFIHMTYSYFFSLANFMQGIFGYLSVCIVYKWAVDWVGLLNMLINMELYPHQAKVQVFLLLMALVCIPWLLLVKPLHFKFDIM | |||||||||||||
5 | 2k48A | 0.16 | 0.04 | 0.24 | 0.38 | HHpred | -----------------------------------------YFQGIDP------FTMSTLQELQ----ENITAHEQQLVTARQKLKDAEKAVEV-----------DP--------D--DVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQKL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5i6jA | 0.11 | 0.09 | 0.81 | 0.67 | MRFsearch | ---NLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEVGQQLQDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQEVKK----------------------IEKMKEKRQAKYTENKLYLLALEATNASVFKYYIHDLSDLIDQCHASLNRALRFLSAELNLEQSKHEGLDAIENAVENLDATSDKQRLMEMYN--------------------------MASQLCAQQPVQSELVQRCQQLQSRLSTLKIENEEVKKTMEATLQTIQDIVTNQQETEQFYFT-------------KMKEYLEGRNLITKLQAKHDLLQKT-- | |||||||||||||
7 | 4dylA | 0.08 | 0.08 | 0.94 | 1.03 | FFAS-3D | --HGVLQEAELRLLEGMRKWMAQRVKPISQSWAEITSQTEGLSRLLRQHAEDLNSGPLSLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIE-KLKSQYRALARDSAQAKRKYDKAKDKYVRSLWKLFAHHNRYVLGVRAAQLHHQHHHQLLLPGLLRSLQDLEEMACILKEILQEYLEIVAIHREMAAAAARIQPEAEYQGF--LRQYGSAPDVPPCVTFDESLLEPGELQLN-----ELTVESVQHTLTSVTDELAVATEMVFRRQEMVTQLQQELRNEEENTHPRERVQLLGKRQVL--------QEALQGLQVALCSQAKLQAQQELLQTK-- | |||||||||||||
8 | 7jh5A | 0.13 | 0.10 | 0.80 | 0.74 | SPARKS-K | ELARKLLEASTKLQRLNIRLAEALLEAIARLQELNLELVYLAVELTDP-----KRIRDEIKEVKDKSKEIIRRAEKEIDDAAKESEKILEEAREAG------------SGSELAKLLLKAIAETQDLNLRAAKAFLEAAAKLQELNIRAVELLVKTIREALEHAKRRSKEIIDEAERAIRAAKRESERIIEEARRLIE-------------------------KGS----------------------ELARELLRAHAQLQRLNLELLRELLRALAQLQELNLDLLRLASEDPDEARKAIARVKRESNAADAERLIREAAAASEKISREAERLI---- | |||||||||||||
9 | 5j1iA | 0.11 | 0.09 | 0.82 | 0.87 | CNFpred | RECAQRI-AEQQKAQAEVEGLGKGVARLSAEAEKVLA-AAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKE--------------------AQAVPATLPELEATKASLKKLRAQAEAQQPTFDA------------LRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLERWQAVLAQTDVRQR---------------------ELEQLGRQLRYYRESADPLGAWLQDARRRQEQI---DSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYI--NAIKDYELQLVTY-SGSESVIQEYVDLRTHYS | |||||||||||||
10 | 6v85A | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | LPLLKNWDKLVKESCSVINAGTSQCI-QN----------------------YG-TGR-GNLFTRDIDLTVVAAWHSWKRISDFWIMIKFQMTYIENGIII-----------------VALFLTYMTIVLMVSDMYEGRNSKLCLTVMRLTEEKDICFYNYMIKQLDLAPSLNYLSCSRLSDPIEITAGFTQYHTGKLNAPSHHTLRPTYKSCCLLHLYIYMTAVEFINRCSLVHVD-------------------------LE--SSASLNQQCRTLITFLWCYFERITV--SQATGMAMTLTDQG--------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |