>PF08392 (289 residues) LRRPRAVYLVDYACFRPNPSYRFSHANFLEHARLTPYIDDSSFRFLTRMISRSGLGDRTY APTCTHYLPPRTGLNEAREEAEEVVFACVADLLARTRVRPEEIDIVVTNCSAFNPSPSLA DTVVNRFGLRVDVRAVHVSGMGCSAGVIAVDVARGLLQSAPPGARALVVSTETTSSFHYV GTSRAMLLPSVLFRMGGGAALLSTSRSSSVSARFRLSHLVRTITAAEDKAYRCAVHEEDE EGNIGVNLSKDLVAVAGNTLKENIATIGARVLPASEKLIFALSFVARKV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LRRPRAVYLVDYACFRPNPSYRFSHANFLEHARLTPYIDDSSFRFLTRMISRSGLGDRTYAPTCTHYLPPRTGLNEAREEAEEVVFACVADLLARTRVRPEEIDIVVTNCSAFNPSPSLADTVVNRFGLRVDVRAVHVSGMGCSAGVIAVDVARGLLQSAPPGARALVVSTETTSSFHYVGTSRAMLLPSVLFRMGGGAALLSTSRSSSVSARFRLSHLVRTITAAEDKAYRCAVHEEDEEGNIGVNLSKDLVAVAGNTLKENIATIGARVLPASEKLIFALSFVARKV | |||||||||||||||||||
1 | 3wd7A | 0.15 | 0.14 | 0.97 | 1.33 | DEthreader | RRAEGLATILAISTATPP--NCVIQADYPDYYFGNSEHMTELKEKFKLLCEKSMIRKRHMCLTEEILKNMSARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNK-GSRVLVVCSENTIPTFRGPSHIDSLVGQALFADGAAALIVGADPDTSIERPLYHIVSASQTLL-PDSDGAIEGHIR--EAGLTVHLKKDVPEFFSANIEKSLVDAFTIGISDWNSIFQVEAKLGL-- | |||||||||||||
2 | 3wd7A | 0.15 | 0.13 | 0.91 | 1.33 | DEthreader | --AEGLATILAISTATPPN--CVIQADYPDYYFGSMELKEKFKLLCEK-SM---IRKRHMCLTEILKANPMARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNK-GSRVLVVCSENTIPTFRGPSHIDSLVGQALFADGAAALIVGADPDTSERPLYHIVSAS-QTLLPDSDGAI-EGHIRE--AGLTVHLKKDVPEFGPAILDQVELKKDKLRAMNKC-E----------- | |||||||||||||
3 | 3tsyA2 | 0.16 | 0.15 | 0.94 | 5.13 | HHpred | QRAKGPATILAIGTATPDH--CVYQSDYADYYFKVTKSMTALKKKFNRICDKSMIKKRYHLTEEMLEMAPNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVCTTSGV-EMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAG-ARVLVVCSEITVVTFRGPDALDSLVGQALFGDGSAAVIVGSDPDIIERPLFQLVSAAQTFIPN----SAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQFDPLGISDWNSLFWI-------- | |||||||||||||
4 | 6gw3A1 | 0.14 | 0.10 | 0.72 | 0.61 | DisCoVER | LRAEGPASVLAIGTANPE-NILLQDEFPDYYFRVTKSEMTQLKEKFRKICDKSMIRKRNCFLNLVEHQTLDARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSAST-TDPGADYHCAKLLGLSPSVKRVMMYQLG-YGGGTVLRIAKDIAE-NNKGARVLAVCCDIMACLFRGPS-ESLLVGQAIFGDGAAAVIVGAEPDESVGER---------------------------------------------------------------------------- | |||||||||||||
5 | 2p0uA | 0.17 | 0.16 | 0.96 | 0.32 | MRFsearch | ----GPATVLAMGKAVP--ANVFEQATYPDFFFNNSNDKPALKAKFQRICDKSGIKKRHFYLDQKILESLNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMY-QQGFAGATVLRVAKDLAENN-AGARVLAICSEVTAVTFRAPSHIDGLVGSALFGDGAAAVIVGSDPPGIERPIYEMHWAGEMVLPESDGAIDGHLTE----AGLVFHLLKDVPGLITKNIGGFLKDTKNLVGSWNELFWAVLDQVEAKL | |||||||||||||
6 | 2d51A | 0.15 | 0.15 | 0.96 | 1.38 | SPARKS-K | QKADGTATVMAIGTAHPP--HIFPQDTYADVYFRATNSEVELKKKFDHICKKTMIGKRYFNYDEPNITSYDERQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCIYMQ-GYAGGTVMRYAKDLAENN-RGARVLVVCAELTIMGLPNETHLDNAIGISLFGDGAAALIIGSDPIIGVKPMFEIVCTKQTVI----PNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSPHPGG---RAILDQVEAKL | |||||||||||||
7 | 4jaoD | 0.21 | 0.20 | 0.95 | 0.71 | MAPalign | ------SVIAGVFGALP--PHRYSQSEITDSFVEFPGL-KEHEEIIRRLHAAAKVNGRHLVLPLQQYPDFGDANEIFIEKAVDLGVEALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAGRLGLRPDVRRMPLFGLGCVAGAAGVARLRDYLRGA-PDDVAVLVSVELCSLTPAVKPTVSSLVGTALFGDGAAAVVAVGDRRAQVRAGGDILDSR-SSLYPDSLHI--MGWDVG-SHGLRLRLSPDLTNLIERYLANDVTTFLDAPGGPKVIDAVATSLALPP- | |||||||||||||
8 | 1qlvA | 0.14 | 0.13 | 0.97 | 0.43 | CEthreader | --AQGLATILAIGTATPPN--CVAQADYADYYFRVTKSMVDLKEKFKRICEKTAIKKRYLALTEYLQENPTARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGA-AGGTVLRLAKDLAENN-KGSRVLIVCSEITAILFHGPNHLDSLVAQALFGDGAAALIVGSGPHLVERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLG---ITDWNSVFWMVHPGGRAI | |||||||||||||
9 | 2p0uA | 0.15 | 0.15 | 0.97 | 1.29 | MUSTER | AQAVGPATVLAMGKAVP--ANVFEQATYPDFFFNITNSNPALKAKFQRICDKSGIKKRHFYLDTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMYQQ-GFAGATVLRVAKDLAENNAG-ARVLAICSEVTAVTFPSETHIDGLVGSALFGDGAAAVIVGSDPRPIERPIYEMHWAGEMVLPESDGAID----GHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNVGASSWNELFWAVHPGGPAI | |||||||||||||
10 | 3vs8A | 0.14 | 0.13 | 0.97 | 1.54 | HHsearch | --HPNSAVLADFIPVQLAK--PVPQRITLELTAYGFARAVQVYKTVKEKFDKAQIKQRQLVLTDIRQAHLKDPRGADLKTRHESYAKVVGKGLEQMFETLEAPDDLIHVTCSGYLAPSPAERMVADRGWFETTVTHSYN-MGCYGAFPAIKMAHGMLASPPK-TRVDIAHTELMSAHNNIASRVDNIISATLFSDGLIKYSVYPEDELQGLRGLRILAMSEHLLPD----SADTMTGVPGSHQFVMTLSPLVPAIIKRHVRAFAVDLLRRGMDFERDGPKIVDHVQEEL | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |