Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | SLSNATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMARYCRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQRYDSVNEKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQASS |
1 | 1i5pA2 | 0.08 | 0.06 | 0.77 | 0.75 | DisCoVER | | -IGKNTRLHDMLEGANLYASGSQQT-----------QSFTAQNWPFLYSLF-QV--NS--NY--I----LSGISGTRLSSLNSARV------------NYSGGVSGLIGAHNFNCSTFVRSWLDSGTDRVATSTNWQTESFQTTLRCGAIRNISGVPLVIDLTRPLHRNIESPGGARAYLVSVHNRKNNIYAANE--------NGTM----- |
2 | 6s2cA | 0.08 | 0.05 | 0.69 | 0.67 | DEthreader | | KPYTGLEIQIIDRLINRSQYQTVPTIG-------DARTSFWE-RL--QA-IPMCIAWTMYYH--S-------------RGITTAWDNAYTDNNKWLQ-------------KMVRFTTIPARGKCNLYKNMFHR-APAYITHFER----WLPGGTYANVY----------SPVL--PDIWCQY----------EAPLPVGKNAATTCVRIFTY |
3 | 4zi8A | 0.07 | 0.07 | 1.00 | 0.57 | CEthreader | | EILEERERGFPVGNVVDLGLDLGSLSARRLRVVSGEMFVNDRLDREELCGTLPSCTVTLELVVENPLELFSAEVVVQDINDNNPSFPTGEMKLEISEALAPGTRFPLESAHDPDVGSNSLQTYELSRVQTREDGTTALDGGTPARSATLPIRITVLDANDNAPAQVLATDLDEGLNGEIVYSFGSHNRAGVRELFALDLVTGVLTIKGRLDF |
4 | 1ocrN | 0.07 | 0.07 | 1.00 | 0.58 | EigenThreader | | SFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTFFDPAGGGDMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFFIFLFTVGGLTGIVLANDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNGMPRRYSDYPSKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVN |
5 | 6gym6 | 0.12 | 0.11 | 0.90 | 0.30 | HHpred | | --GNPQDHIDALKSIR----KQEPKGNPSLPVPAHCTREVLIVFGSLSTRVKVLGLSAQVAICKELKATNYKILLDETNEAVTPGGGGGGG----------GGGGGGGGGPTRIFEDTPTFCSCHVYGGYPSLPTVCPCCDLML-ILGGGGGGGGGGGGGGKTFAEVPTTEKFEDCFSCQSRFPGGGGGGGGG-GG--GGSRY-RCECKQE- |
6 | 2jwaA | 0.20 | 0.04 | 0.19 | 0.40 | MRFsearch | | ---------------------------PAEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQKI------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 2akhY | 0.11 | 0.11 | 0.97 | 0.46 | FFAS-3D | | ALGIMPYISASIIIQLLTVVHPTLSGRRKISQYTRYGTLVLAIFQSIGIATAVVSLVFLMWLGEQITERGIGNGISIIAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVRGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGPAIASWFGGGTGWNWLTLQPGQPLVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKV------ |
8 | 7aavA | 0.12 | 0.10 | 0.85 | 0.83 | SPARKS-K | | LGALKYMPHAVLKLLENMPMPWE---------QIRDVPVLYGAISEIPWVIEPVYISQWGSMWKRDRRHFKRMRFPPFDD----------EEPPLDYADNILDVEPLEAI----QLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYPMMSTLYRLANQL-------LTDLVDDNYFYLFDLKAFFTSKALNMA-IPGGPKFEPLVRDINL |
9 | 5nv9A | 0.04 | 0.01 | 0.24 | 0.60 | CNFpred | | --NTGGILPLFIVTEMPIGIAG------------LIIAAIFAAAQSSISSSLNSISSCFNSDIY---------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5vkqA | 0.05 | 0.03 | 0.70 | 0.67 | DEthreader | | ------YTCQITKEEVKIPESDK--QIVRMLLEA--FCNMITPLLIACHRAHLAAEALHLAIQPLHDATGKDGLTDKA----GD-FMHGAGHHVLRMFVSPADKRN-E--------------------------PVWIGFGHKFKVIIKFYLTSHIYLMIHLSIVTPYPVL--R--LSLVHAVCRQCFLAFLLAC----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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