>PF08318 (322 residues) LQQATMQLRHLITQKFDESVKKDDLASVERFFKIFPLLGMHDHGIEKFSQYICHKLNAKA QKELRTSMDTAKAEKRTVVAFADTLTILLENIARVVEVNQPIIETYYGKGRLHQMVRVLQ EECDQEVKICLLEFNKGRHIQRRVAQINEYIKTGGSGGSSVAGHYRKPSGGSMDKLNPKD IDSLIGEITIMHSRAELYVKFIKRRVARDLDSSTLDEEKKRTALAGVEKCLKDSDLSRQM QELLGIYLLFERFFMEESVLKAIALDAHEPGQQCSSMIDDVFFIVRKCIRRANTTQSLDG ICAVINNAATELENDFIAAIKE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LQQATMQLRHLITQKFDESVKKDDLASVERFFKIFPLLGMHDHGIEKFSQYICHKLNAKAQKELRTSMDTAKAEKRTVVAFADTLTILLENIARVVEVNQPIIETYYGKGRLHQMVRVLQEECDQEVKICLLEFNKGRHIQRRVAQINEYIKTGGSGGSSVAGHYRKPSGGSMDKLNPKDIDSLIGEITIMHSRAELYVKFIKRRVARDLDSSTLDEEKKRTALAGVEKCLKDSDLSRQMQELLGIYLLFERFFMEESVLKAIALDAHEPGQQCSSMIDDVFFIVRKCIRRANTTQSLDGICAVINNAATELENDFIAAIKE | |||||||||||||||||||
1 | 5yfpE | 0.06 | 0.05 | 0.79 | 1.07 | DisCoVER | FGIEKRSLEAILVDMTSKFTVNDPANYSLNDVDSMKCVLILKIMFLGIVSYMEIALE-VAYWKI-CKV----DINKTAGVVNLNFLKFISMSTEILDLLSISIKSIFIKAQIIMTNSQMEILINIILQETITVI-----STKFS-AI--LCKQKKDFVPKSQELLDQD-TLPAIEI-VN---ILNLIFEQSSKFL-KG--K---------------------------------NLQTFLTLIGEELYGLLLS--HYSHF--QV--NSIGGVVVTKD------IIGYQTAIEDWGVA-SLIDKFATLRELAIQSYISNRED- | |||||||||||||
2 | 5yfpD | 0.10 | 0.09 | 0.87 | 1.00 | DEthreader | HFLLDEELLLVRYINDPEIVPPSVF-NMKVILDPFLFTFDMNKFLPKIQMTMDYLFT-VEV-ES--N---------NPYANHNIFKTALDFQRLFYNLLN--VF--NTANTFREKISYCILDLLNHFYNYYLGLFNSLIGTDRIITAFEIPHFYQAG---------KGLSKSFNNLTLDTILQFSASVLWILNWLPGLKKAINIVSQEP----NSLGNL-KILLDDKASKKF-D-ETIDGFKTLKFKLITILRFNIRALCIYDIGSFQSIELDIASLISELRRTESKLKQQLPE------KE-KNSIFIGLDIVNNYALIKA | |||||||||||||
3 | 4y21A | 0.09 | 0.09 | 1.00 | 0.61 | CEthreader | FVKLLDQLHNSLRIDLSMYRNNFPLQDLKSTVDLLTSIDCVKACLNSTYEYIFNNCHELYGREYQTDPAKKGEVPPEEQGPSIKNLDFWSKLITLIVSIIEEDKNSYTPCVGKISAEVMWSLFAQDMKYAMEEHDKHRLCKSADYMNLHFKVKWLYNEYVAELPTFKDRVPEYPERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMRRFAKTISNVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQVKGTGADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVL | |||||||||||||
4 | 4y21A | 0.09 | 0.07 | 0.82 | 1.07 | EigenThreader | AEVMWSLFAQDMKYAMEEHDKHRYMNLHFKVKWLYNEYVAPTFKDAWFEPFVIQWLDENEEVSRDFLHGALERDKKDSCSVVDVFSQLNQSFEIIKKL---------ECPD-PQIVGHYMRRFAKTISNVLLQYADI-----VSKDFASYC----------------------SKEKEKVPCILMNNTQQLRVQLEKMFEAM---------GGKELD------------AEASGTLKELQVKLNNVLDELSHVFATSCVRQMGDILSQVKGTGNVNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVL | |||||||||||||
5 | 5yfpE | 0.10 | 0.08 | 0.80 | 1.96 | HHpred | IEKYSEMMENELLENFNSAYRENNFTKLNEIAIILNNFNGGVNVIQSFINQHDYFIFIK-NV---KFKEQLIDFENHSVIIETSMQNLINDVETVIKNESKIVKRVFEEKATHVIQLFIQRVFAQKIE--------------------------------------------------PRFEVLLRNSLSISN--LAYVRILHGLFTLFGKTKSLIDYFQLLEI-DDSNQILSTTLEQCFADLFSHYFGIEKRSLEAILVDMTSKSPNSPANYSLNDVDSMLKCVVESTARVMELIP----NKAHLYILEILKDSYMEI--- | |||||||||||||
6 | 5yfpE | 0.10 | 0.09 | 0.84 | 0.65 | MRFsearch | --KYSEMMENELLENFNSAYRENNFTKLNEIAIILNNFNGGVNVIQSFINQHDYFIFIKNVKFKEQLID----FENHSVIIETSMQNLINDVETVIKNESKIVKRVFEEKATHVIQLFIQRVFAQKIEPRFEVLLRNSL--------------------------------------SISNLAYVRILHGLFTLFGKFTKSLIDYFQLLE-----IDDSNQILSTTLEQCFAD--LFSHYLYDRSKYFGIEKRSLEAILVDMTSKFTVSPANYSLNDVDSMLKCVVESTARVMELKAHLYILEILKIMFLGIVDSYMEIALE | |||||||||||||
7 | 5h11A | 0.11 | 0.11 | 0.96 | 1.18 | FFAS-3D | -------LGSQLIQEFTAAQRRGEIGRMREVAAVLLHFKGYAHCVDVYIKQVFEDIAILCQRVNKQVGE---VFCSPETVMAKLIQSIFEKIQAHVKE---RLDETRNSDQYLKNLYDLYTRTTALAAKLLSKLIKNIFIDMERQYLQNRSGMILQRYYDSKNHQKRIDTHGETLLSQEVVVNLLQETRHAFERCNKLVDHIDYALEIGLSAIPSADQQANTIFHLFDKQFNDHEVIEQMEVKLDTGIDRTLNCMIGQMKYILTTDENNVMIQYTTACSKVCAYVGKQVERVRRSMDGKNVDTVLTELGVRFHRLIHEHLQQ | |||||||||||||
8 | 5k7vA | 0.12 | 0.10 | 0.80 | 0.79 | SPARKS-K | IDILAESSKKSIEELARAADNKT-----------------TEKAVAEAIEEIARLATAAIQLIEALAKNL-----ASEEFMARAISAIAELAKKAIEAIYRLADNHTTDTFMARAIAAIANLAVTAILAIAALASNEEFMARAISAIAELAKKAIEAIYRLADNHTT----------DKFMAAAIEAIALLATLAILAIALLAS-------NHTT-------------------------EEFMAKAISAIAELAKKAIEAIYRLADNHTSPYIEKAIEAIEKIARKAIKAIEMLAKTEEYKEKAKSAIDEIREKAKEAIKR | |||||||||||||
9 | 4fgvA | 0.10 | 0.09 | 0.93 | 0.95 | CNFpred | --PFIEEIIRNIGKITCDLTPQQVHTFYEACGYMVSAQ-GNRNQQERLLAELMAIPNAAWDEIIKAATMNPGI----EPDTIKIIGNIMKTNVSACSSIGPYFFPQI--GRLYNDMLQMYAATSQLISEAVA-VRGLRTIKKEILKLVETFVEKAEDLQAVRSQ-----------MIPGLLDSVLVDYNRNVARDAEVLKAMTVIITRLQGMEDQVPAIMENVFECTLDMINKDF--AEYPEHRVEFFNLLRAINLYCFPALLKLDNRQFKFVIDSCMWAGLNMCLELINNIAEKTDVQTCNAFFNQFFIRILQDVFFVLTD | |||||||||||||
10 | 5yfpD | 0.10 | 0.09 | 0.89 | 1.00 | DEthreader | ILIQRKLDEIELLLVRYINDSVFNMKVILDPFLLFTQTSFDDYMNKSFLPKIQMTMDYLFTVEV--ES--------NNPYHNIFKTALDFQRLFYNLLNVF--N---TANTFREKISYCILDLLNHFYNYYLGLFNSLIGTDLTRKIITALFKEIPHF-YQAGK-GLSKSDLFNNLTLDTILQFSASVLWILNWLPGLKKAINIEVSQE---NSLG--NLKILLDDKASKKFDE--TIDGFKTLKFKLITILRFNIRALCIYDIG--IEL----ASLISELRRTESKLKQQLPE------KE-KNSIFIGLDIVNNYIVMMY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |