Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LGAAADERKARLAKLKSLKRKQPADEIVAPESTRSPSPPASPDVAKLHLSGRNYDPETKGPKLGFEAPPTLALETPTLEQQAAEVEEEIRKKAEEEEQDDKGIDLFKLQPKKPNWDLKRDLEKKMEVLNVRTENAIARLVRERI |
1 | 2i4bA | 0.07 | 0.06 | 0.92 | 0.61 | DisCoVER | | ---YIP-IV-EAAPLWAGGQWQMPMPHLITEGIITNGNKVPMYVLAQLQGNGIAVAPGVNLDITKAAFKAAHTFPNVNQ-DF-WIRYWFAAGGVDPDTDIDLLGTMDAFSTGDPWPYRIVT----ENIGYMAGLTAQEEYLAI- |
2 | 6ar6A | 0.09 | 0.07 | 0.78 | 0.83 | DEthreader | | NKFFRKRMEIIYDKQKNFINYYKIDDIKTYLSNEYSK--LYIS-EELLAAA------IINQI--IEYLSLNPSEDNDFNTTTNTFIDSIMAEA--NADNG-RFMMELGYLRVFFEEEVMLECEINVS----------------- |
3 | 2g8yA | 0.03 | 0.03 | 1.00 | 0.39 | CEthreader | | SEEQEAKLVADHLIAANLAGHDSHGIGFPSYVRSWSQGHLQINHHAKTVKAVTLDGDRAALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPVAPFHGRDSRFGTNATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNP |
4 | 6f1tX2 | 0.06 | 0.06 | 0.98 | 0.62 | EigenThreader | | HIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLIL---ERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 5j8eA | 0.10 | 0.08 | 0.78 | 0.23 | HHpred | | -----------CESLLTIQTFNVDAPCQTVEDNKIDPAYFDENGDNWRLKISNLKKILKGILDYNHTLPDVNLIGSDAAE-LGRMLQLIL-------------GCAVNCEQ------KQEYIQAIMMMEESVQHVVMTAIQELM |
6 | 1t1mC2 | 0.16 | 0.08 | 0.52 | 0.55 | MRFsearch | | --PTTEQREKWVKKAKEIVE--------------------------------------------------------EGKIAIRNIRREILKKIKEDQKEG-----------LIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKK |
7 | 2lquA | 0.19 | 0.15 | 0.77 | 0.58 | FFAS-3D | | LERSAKDITDEIDAIKKDAALKGV----------------------------NFDAFKDKKTGSGVSEN---PFILEAKVRATTVAEKFVIAIEEEATKLKETGSSG--EFSAMYDLMFEVSKPLQKLKTVSDAAIAKKMREKL |
8 | 1ls4A | 0.15 | 0.12 | 0.78 | 0.86 | SPARKS-K | | LTEQANAFKTKIAEVTTSLKQEAEKHQG--------------SVAEQLNAFRNLNNSIHDAA----TSLNLQDQLNSLQSALTNVGHQWQDIATKTQASAQEA-----------W---APVQSALQEAAEKTKEAAANLQNSIQ |
9 | 1ea8A | 0.12 | 0.08 | 0.62 | 0.49 | CNFpred | | WELALGRFWDYLRWVQTLSEQVQEEL------------------------------------------------SSQVTQELRALMDETMKELKAYKSEL----EEQLTPV--AEETRARLSKELQAAQARLGADMEDVCGRLV |
10 | 6yvuB | 0.07 | 0.05 | 0.72 | 0.83 | DEthreader | | LTLLRSKLFQFKLLQSNSKLASTLEKISSSNEDEKMKFQESLKKVDEIAQREI--R------------------------------------E--DKERESEENRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSAST |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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