Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | ARRRHSMKKKRKSVRRRKTRKNQRKRKNSLGRSFKAHGFLKQPPRFRP |
1 | 6yvuA | 0.08 | 0.08 | 1.00 | 1.33 | DEthreader | | GYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEINILRDIGEN |
2 | 2rgrA | 0.08 | 0.08 | 1.00 | 1.50 | DEthreader | | YVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVKRNIYE |
3 | 6c0fI1 | 0.12 | 0.10 | 0.88 | 1.06 | SPARKS-K | | KRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKEN------ |
4 | 6hftA | 0.11 | 0.10 | 0.94 | 1.33 | DEthreader | | VIDRKEQELKAKEEKQQREAQERENKKIMLESAMTLRNIT---NIKTF |
5 | 3teqA | 0.04 | 0.04 | 1.00 | 1.33 | DEthreader | | LQKWLQLTHEVEVQYYNIKKQNAEKQLMVAKEGAEKIKDDVHITAKLS |
6 | 2zetC | 0.15 | 0.15 | 1.00 | 1.33 | DEthreader | | EHVWAVVQRDFDLRRREEERLQGLKGKIQKESSKRELLSLNARVCCCD |
7 | 6jooA1 | 0.22 | 0.19 | 0.85 | 0.25 | HHpred | | ---RLASSGIARRTRRLYRRK--RRRLQQLDKFIQRQGWPVIELEY-- |
8 | 1kx5A | 0.08 | 0.02 | 0.25 | 0.87 | DisCoVER | | -------------------------------GKAPRQLATKAA----- |
9 | 3j3bO | 0.31 | 0.25 | 0.81 | 0.38 | MRFsearch | | --KIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV------- |
10 | 4yv4A | 0.13 | 0.12 | 0.94 | 1.06 | SPARKS-K | | ENWRDAMKTELQTIRTEIQEETARRQEELNAQNLVKMQELMSNFF--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|