Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LGVLCRKLTSTPAVQLPHALPALTRHVVRCKDALSAPQDQKLKDNASQSSLLLHKIKTQITTLLNGRSREGRFAAVGLVKAVIDVGGWEMLRGSEPWLRSLLSILQKGDSFACKEMAVVTLTRIYMLLHPYPTLAREIATATLPAFITASLQIVKSDGRPLSIVETVCDAFAALIPLYPTTFRPQASQIPSAIRLYLAPTMSD |
1 | 6yleC | 0.15 | 0.13 | 0.89 | 1.33 | DEthreader | | VSTLARNLE-I---AKGNEFHTILATLR-SPVY--I--------NEQLLKSELSFLVTKILKLIRSGNDFDLWKGCHTSVVTCAYNPLVLSTHGGQLLAAIYSRLEQKVGKQLFNTLISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQY----E--PELVLPVLQRILKRNTTTFKPFTNKFRTVLINL-IISDYR |
2 | 6n1zA | 0.12 | 0.11 | 0.91 | 1.33 | DEthreader | | KIVIRELLPNGLREVRSSVAYAVSAIAHWDW--P--------------EA-WP-QLFNLLMEMLVSGDLNAVHGAMRVLTEFTREVTDTQMPLVPVILPEMYKIFTMAYGIRTRSRAVEIFTTCAHMICNMEGAAKVLIFPVVQQFTEAFVQALQIPDSDSGFKMEVLKAVTALVKNFPKHMVSSMQQILPIVWNTLTESAA- |
3 | 6yleC | 0.17 | 0.15 | 0.89 | 3.20 | HHpred | | VSTLARNLEIAKGNEFHTILATLRSP-----VYINEQL------LKSE----LSFLVTKILKLIRSGNDFDLWKGCHTSVVTCAYN-PLVLSHGGQLLAAIYSRLEQKHGKQLFNTLISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQYE----P--ELVLPVLQRILKRNTTTFKPFTNKFRTVLINLIISDYAS |
4 | 6yleC | 0.16 | 0.15 | 0.90 | 1.21 | SPARKS-K | | VSTLARNLEIAKGNEFHTILATLR------SPVYINEQLLKSE---------LSFLVTKILKLIRSGNDFDLWKGCHTSVVTCAYNPLVLSTHGGQLLAAIYSRLEQSHGKQLFNTLISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQY------EPELVLPVLQRILKRNTTTFKPFTNKFRTVLINLIISDYAS |
5 | 6yleC | 0.17 | 0.15 | 0.89 | 3.26 | HHsearch | | VSTLARNLEIAKGNEFHTILATLRSP-----VYINEQL------LKSE----LSFLVTKILKLIRSGNDFDLWKGCHTSVVTCAYN-PLVLSHGGQLLAAIYSRLEQKHGKQLFNTLISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQYE----P--ELVLPVLQRILKRNTTTFKPFTNKFRTVLINLIISDYAG |
6 | 6yleC | 0.16 | 0.15 | 0.90 | 1.59 | FFAS-3D | | VSTLARNLEIAKGNEFHTILATLRSPVYINEQLLKSE---------------LSFLVTKILKLIRSGNDFDLWKGCHTSVVTCAYNPLVLSTHGGQLLAAIYSRLESSHGKQLFNTLISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQYE------PELVLPVLQRILKRNTTTFKPFTNKFRTVLINLIISDYAS |
7 | 6ahoA | 0.11 | 0.10 | 0.91 | 1.33 | DEthreader | | KDIREVLLKLCLNDNENTIKNGASYCIVQIAVDF-P-----------DQ--WP-QLLTVIYDAISHQH--S-LNAMSLLNEIYDDVVSEMFGGILATMEIVFKVLNTESTLIAKIAALKLLKACLLQMSSHDESRKSFVSQCLATSLQILGQLLTLNFGQLKFKSIIYENLVFIKNDFRKHFSELQKQFKIMAIQDLENVTHK |
8 | 6yleC | 0.14 | 0.13 | 0.89 | 1.33 | DEthreader | | VSTLARNLE-I---AKGNEFHTILATLR-S-PVY-I-----N---EQLLKSELSFLVTKILKLIRSGNDFDLWKGCHTSVVTCAYNPLVLSTHGGQLLAAIYSRLEQKVGKQLFNTLISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQ---Y---EPELVLPVLQRILKRNTTTFKPFTNKFRTVLINLIISDYL- |
9 | 4xriA2 | 0.10 | 0.10 | 0.97 | 1.03 | FFAS-3D | | LSVFVQNAANDSLSAVASLSTVILQRLEETLPLQQQVVSVEDKLIDKEIAPQGDRIMQVLLQILSTCGGSVPEGVFAAISALANAMEEEFAKYMEAFAPFLYNALGNQEEPSLCSMAIGLVSDVTRSL-------GERSQPYCDNFMNYLLGNLRSTTLANQFKPAILQCFGDIASAIGGHFETYLTIVAQVLQQAATITAGP |
10 | 6n1zA | 0.09 | 0.08 | 0.92 | 1.33 | DEthreader | | EKICPFTIAIKYSND-PVVASLAQDIFKELSQI-EAC-----------QGPMQMRLIPTLVSIMQAPIAGLCATAIDILTTVVRNTKPPLSQLLCQAFPAVAQCTLHTDDNATMQNGGECLRAYVSVTL--E-QVAQWHHNGLWYVMQVVSQLLDPRTSEF-TAAFVGRLVSTLISKAGRELGENLDQILRAILSKMQQPTGK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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