Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KITKMPYKSLQPEPIDTPIRMKQRPKTSLGKVDVKGELLAVSNLTRTPGEITYTHTEPAGDGKSIRTFKESPKQILNPVAYVTGMKRWPRTPKEEAQSLEDLAGFKELFQTP |
1 | 2rltA | 0.03 | 0.02 | 0.61 | 0.65 | DisCoVER | | -------------GLQKRHARVKWIDGRLEELYRGEADMPDE-VNI---------------DELLELE-----------SEEERSRKIQGL---LKSCTNPTENFVQELLL- |
2 | 1r0uA | 0.08 | 0.08 | 1.00 | 0.61 | CEthreader | | MKQETPITLHVKSVIEDDGNQEVIEFRTTGFYYVKQNKVYLSIVKVSEGEVLVMRSGAVKMNQRFVTGASTIAKYKMSFGELELKTSTKSIQSDLDEEKGRISIAYDMHVGH |
3 | 4f7rA | 0.10 | 0.10 | 1.00 | 0.57 | EigenThreader | | EAFTREDYVFMAQLNENAERYDEMVETMRKISGMEGELSKVFYYKMQGDYYRYLAEAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFYYEILASPDRACELARKAFDA |
4 | 1zh1A | 0.15 | 0.08 | 0.53 | 0.20 | HHpred | | DNVKCPCQVPAPEFFTEVDGVRLHRYAPACKPLLREEVTGLN----QYLVGSQLPCEPEPDVA------------------------------------------------- |
5 | 5l4kZ | 0.13 | 0.09 | 0.67 | 0.57 | MRFsearch | | --PVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQ-------------DELEMLVERLGEKDTSL---------------------YRPALEELRRQIRS- |
6 | 1nwxD | 0.14 | 0.12 | 0.92 | 0.34 | FFAS-3D | | ------ITLQKPIITKAKKSISNFKLRQGMPVGIKVTLERMYVFLEKLINIGLPRIRDFRGINGIKEQLIFPEITYDMVDKTRGMDITIVT---TAKTDEEARALLQSMGLP |
7 | 3hgfC | 0.05 | 0.04 | 0.78 | 1.29 | SPARKS-K | | KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKS-----ENMIKSMEKYIKDLDE-------IKEQSPKAEMN------------- |
8 | 3nuhA | 0.05 | 0.02 | 0.39 | 0.40 | CNFpred | | --------------------GLEHEKLLDEYKELLDQIAELLRILGSADRLMEV-------REELELVREQ----------------------------------------- |
9 | 6fb3A | 0.05 | 0.04 | 0.90 | 1.00 | DEthreader | | -----DNGWSLHYNFTYSVTEVRRDPRLAVGTNGGLYNSGLL-DYDHEGR-TN-SESVKKRVTTLNSAHKIGSYGLTLDEEKARVLDQARQRALGSAWAKEQQKARDGR--- |
10 | 2pmsC | 0.10 | 0.10 | 0.96 | 0.68 | MUSTER | | SHMDAEEVAPQAK-IAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAA--KKAELEKTEADLKKAVNE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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