>PF08017 (368 residues) SQGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRD AENRSQGNVLERRQRDADNKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVLER RQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGN VLERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDADNK SQGNVLERRQRDVENKSQGNVLERRQRDADNKSQVGQLIGKNPLLSKSTISRENNHSSQG DSNKQSFSKKVSQVTNVANRPMLTNNSRTISVINKLPKTGDDQNVIFKLVGFGLILLTSR CGLRRNEN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SQGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDADNKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQVGQLIGKNPLLSKSTISRENNHSSQGDSNKQSFSKKVSQVTNVANRPMLTNNSRTISVINKLPKTGDDQNVIFKLVGFGLILLTSRCGLRRNEN | |||||||||||||||||||
1 | 3zgqA | 0.04 | 0.04 | 0.97 | 1.10 | EigenThreader | IDLFEVEDTIGQQLEKSRLALYNLLAYVKHLKEVRSLVTWGNYAWVYYHMEEAQKYTGKIGNVCKKLETDCEKGWALLKFGGKYYQKAKAAFEKALEVEEFNIGYAITVYRLDDVKSFSLGPLRKAVTLNYIKVFLALKLQDVAEGEKYIEEILYVLRYAAKFYRRKLELLKKALEVTFLHHQMGLCYRAQMIQIKKATDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGSNAEDIFRKALR-----------LDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDFLTALCELRLSI | |||||||||||||
2 | 2tmaA | 0.05 | 0.04 | 0.74 | 1.37 | FFAS-3D | --------------DAIKKKMDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD-KYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAKLKYKAISEELDHALND-------------------------------------------------------------------------------- | |||||||||||||
3 | 6yvuA | 0.09 | 0.09 | 1.00 | 1.92 | SPARKS-K | RTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVERIKDLKQREDKLKSHYYQTCKNSEYLKRRVTNLEFNYTKPYPNFEASFVHGDNDNIRYATALQTCAGGRLVVQDRVTIIPLDKIYTRPISSQVLDLAKKIALIAMEFIFGNSLICE | |||||||||||||
4 | 6af0A1 | 0.08 | 0.02 | 0.24 | 0.94 | DisCoVER | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATFAGYFLRKQFGNVDALAHKAIQYT-DVNAIA-SDG-WYLLARKEHYDGNL--ERASDYYRRADDARGGAERGYLPAKFGAAQLSVLKNDLGE--- | |||||||||||||
5 | 5u1sA | 0.05 | 0.03 | 0.60 | 0.67 | DEthreader | -----NNIDLAIIIKLINNLLQIILKRKLSFFSVTTSCKHKNYLEKILSYEETTVQISDLNVILENATNFQCTVIYINSNIKSVLFNSVLLARTILKFEK------------------------------------------------------------------------------------------------------------------SAQKKIEIFFTRLKITYNSSIFCSLRGIIVYLLNDNLSKITKLLIELSLCIKSKEKYYSSIV-P----YADNYLLEYIDDALMMKN-------------------ALLH----ASSLINVHLW-DSDLTAFQIYFGLPKELFLKVILSSRLSLF | |||||||||||||
6 | 6af0A1 | 0.06 | 0.06 | 0.99 | 0.72 | CEthreader | TELCSVFENEQSPRIYWMTVALAYAKQNKIDFAIEMLLRGANVLQGNQREKLGIITCICWLYLWKSREAPRVAPDGVPASEAKTKEYYLQLATQSLNDASRINPAFPPLFLARGVLILLKASLQPSSKADSNKAEQLRNALKSFEEAIRVSQGRNMLAVMGKARALFSLGRYPESLAAYQDVVAKMPDMVRIGIGCCFWQLGFKDDAKIAWERCLEINPDSKHANILLGLYYLDASGHVPTNSPEFIRLYKKAMTEYTQKSFKLDKNLPLTCATFAGYFLSRKQFGNVDALAHKAIQYTDVNAIASDGWYLLARKEHYDG----NLERASDYYRRADDARGGAERGYLPAKFGAAQLSVLKNDLGEAK | |||||||||||||
7 | 6af0A1 | 0.08 | 0.07 | 0.92 | 1.07 | EigenThreader | CSVFENEYWMTVALAYAKQFAIEMLLRGANVLLGIITCICWLYLWKSREAEYYLQLATQSLNDASRINLFLARGVLILLKASLAEQLRNALKSFEEAIRVSQLAVMGKARALFSLGRYPESLAAYQDVVAKMPDPRIGIGCCFWQLGF---------------------KDDAKIAWERCLEINPDSKHANILLGLYYLDASGHVEFIRLYKKAMTEYTQKSFKLDKNLPLTCATFAGYFLSRGNVDALAHKAIQYTDVNAIASDGWYLLARKEHYDG---NLERASDYYRRADDARGGAERGYLPAKFGAAQLSVLKNDLGEAKLRLEKMIQHSKN------YEAMILLGTLYAEEVFANQSAAVKE | |||||||||||||
8 | 6gmhQ | 0.15 | 0.04 | 0.29 | 0.37 | HHpred | ----------------------------------------------------------------------------------------------EKSNLKEVLNAVKEL---------ELAHRYFSYLSKLA---LA--ATEARQCSDLLSQAQYHVARARKQDEEERELR------------AKQEQEKLLRQKLLKEQEEKRLREK-------EEQKKLLEQRA-QYVEKTKNI------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 6gmhQ | 0.11 | 0.08 | 0.75 | 0.70 | MRFsearch | --QEKRDIAKGHLKKVTEQQILEQTDIQGALSAYGTATRILQEKVQHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDREKEKRHQDRALAIYKQVLRLQECKQTLLKARHVAEVLNAVKELELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILM------------------------------------------------------------------------------------------ | |||||||||||||
10 | 7jg5d | 0.10 | 0.10 | 0.94 | 1.22 | FFAS-3D | ----VIAFIIVKWVVPPVRTLMRNQQEAVRAALAESAEAAKKLADADAMHAKALADAKAESEKVTEEAKQDSERIAAQLSEQAGSEAERIKAQGAQQIQLMRQQLIRQLRTGLGAEAVNKAAEIVRAHVADPQAQSATVDRFLSELEQAASRQSLAALVEKFDSVAGGLDADGLTNLADELASVAKLLLSETALNKHLAEPTDDSAPKVR--LLERLLSDKVSATTLDLLESNLIDAVEHTARLALLKRAEIEVDEVEEQLFRFGRVLDAEPRLSALLSDYTTPAEGRVALLDKALVNQGLLRGERADEAVIDLAELAVS---RRGEVVAHVSAAAELSDAQRTRLTE-------VLSRIYG------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |