Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MRIQLLLVSTLVASIVATRVEDMATFRTEKQWQQDLQYRREFVKRQLAPKPKSNIVVSHTVSCVIDGGNMTSVWRFEGQFNPHIASEVILHDTSGLYNVPHEVQNDGQVLTVTVKRSAPADIAKVLISLKPVQLSSGQYECRPQLQLPWVPRPSSFMYDSYRLWYEKRWLTIILYVFMWTYLVTLLQYCIVRFIGTRLFYFLQRNITIRFTGKP |
1 | 1im3H | 0.11 | 0.05 | 0.42 | 0.41 | DisCoVER | | -----------------------------------------------------PWFQIEDNRCYIDNGKLFARGSIVGNMS-RFVFDPKADYGGENLYVHDVEFVPGESLKWNVRLDVMPIFETLALRLVLQ-GDV-IWLRCVPE--------------------------------------------------------------------- |
2 | 5l3qB | 0.07 | 0.05 | 0.77 | 0.67 | DEthreader | | ------NVAADIAVQLCESVANLE--TVTSTVKQALQESLVQILQPQRRVDMLRDI----CGVNG----VGKSTNAKIWLNGFSVLIAACDT-FR-GAVERTTLSALH-V-L-----Y--GKDAAA-AIAR-GFD-VVLVDTAGRMQDNAPL-TALAKLITVTFALASPRLI-DG--I-VL--TKFDTIDDKVGA--S---------VALMKA- |
3 | 1witA | 0.09 | 0.04 | 0.43 | 0.31 | CEthreader | | ----------------------------------------------------LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGED-EAIFEVIVQ-------------------------------------------------------------------- |
4 | 5m59A | 0.09 | 0.08 | 0.99 | 0.73 | EigenThreader | | LMADMVYVTQSAGRILRAIFEICLKKGWASVAKLALNMCKMAEKRM-WPTMSFPRVEIQGNVQPMTRSMLRIELTITPNGVTESFWILVEDCDGEEILF--HDVFILRHTVEFTVPISEPMPPNYFISVISDRWMHSETRMPVSFQKLILPERFPPHKIQTQTFNSLYNVCAEFALLRHWELVDLRFQDWQKRLTTDLKLLEQGDLILATPLQW |
5 | 5y00A | 0.12 | 0.07 | 0.56 | 0.29 | HHpred | | ----------------------------------VVIA-SPL-FHMFAHYPEDSYTLDRHHEYSLEDGCVTSKTTLNAGFDPKGAEVKITPHGPNGIRSTVYLKEDGTIQIGTIVTPVGGRVTQPKAHFLHTQIIQHIVTELAVAGNLWHGMDEL----------------------------------------------------------- |
6 | 5twvA | 0.10 | 0.06 | 0.56 | 0.40 | MRFsearch | | --ILILIVQNIVGLMINA------------------IMLGCIFMKTAQAHRRAETLIFSKHVITPRHGRLCFMLRVGDLR-KSMIISATI-----------------HMQVVRKTTSP--EGEVVPLHQVDIPMENSIFLVAPLIIYHVSPLYDLAPSDL------------------------------------------------------ |
7 | 6b3yA | 0.17 | 0.14 | 0.82 | 0.55 | FFAS-3D | | -RVQESIIHRLFDALTFGHEKDPETFRDYTCWKET----EAEAQEVSLPLDKNECVYKLSSSVKTNRGVGKIAMTQKRLF-------LLTEGRPGYVEI----ATFRNIEEVKNSTVAFLLLRIPTLKIKT-VAKKEVFEANLKSEC-----------DLWHLMVKEMWAGKQLYVQQALTNVLLMDAVVAIHAASKLAYFDN----------- |
8 | 3klxA | 0.07 | 0.05 | 0.71 | 0.65 | SPARKS-K | | --------------------------TPYGLTKDEFSTLDSIIRTHHTFPRSPNT-CTSLIAHRVDKHFIKSCTIRVNEIKVGTIREVSVVSGLPASTSVEVLDEEKRILSFRVLGGHRLNNYRSVTSVNEFVVKKKRVYSVVLESYIVDIPQGNT----------EEDTRMFVDTVVKSNLQNLAVIST------------------------ |
9 | 4ktpA | 0.07 | 0.05 | 0.68 | 0.71 | CNFpred | | -------------------------------------------------------AVLMKYTVESDDTDAVLDTGIDYDVWSDHLQGHHYFSHPTGDGVTAKTVSYEDTVTVVETCSLDADGSGRTFPLSLEA--GKPVTLEKAMIIYSSNDVDNPQDEALLEAK-EEEKAANEWDNLWSHYDVTINIIDQVALRFNIYHAIIA---------- |
10 | 5l56A | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | | ------------THLVVYVIYKLSNLTL-VQVTQVPVESCVHCCSRQCFASDLQVQLTVQPNVSV--TMSQVPLVLQAWNVPDLGVNCSFE----DFTE-TESILEDGRIHCHSPSAVAPITQRVKLYLKSKET------KFASVDFVFYNCHACVNPCHWCTNNAADCAGRV-SCPQIRIDNPQN-IQ-AH-----KAD-LYISAEQIVCGSN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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