>PF07946 (333 residues) SYYMEILMVTGLLAYIMNYIIGKNKNSRLAQAWFSSHRELLESNFALVGDDGTSKEAVST GKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMMRPACDQVQIKVTLNEE DMDTFVFAVGTKKAMARLQKEMQDLSEFCGDKPKSGAKYGLPESLAILSEMGEVTDGVMD NKMVHYVTNNADKIESIHFSDQFSGPKVMQEEGQPLKLPETKKTLLFTFNVPGMGNTSPK DMDALLSLMNMVIYSIDKVKKLRLNREGKQKADRNRARVEENFLKQTHAQRQEAAQTRRE EKKRAEKERIMNEEDPERQRRLEEAAQRREQKK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SYYMEILMVTGLLAYIMNYIIGKNKNSRLAQAWFSSHRELLESNFALVGDDGTSKEAVSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMMRPACDQVQIKVTLNEEDMDTFVFAVGTKKAMARLQKEMQDLSEFCGDKPKSGAKYGLPESLAILSEMGEVTDGVMDNKMVHYVTNNADKIESIHFSDQFSGPKVMQEEGQPLKLPETKKTLLFTFNVPGMGNTSPKDMDALLSLMNMVIYSIDKVKKLRLNREGKQKADRNRARVEENFLKQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKK | |||||||||||||||||||
1 | 6t84A | 0.12 | 0.06 | 0.50 | 0.91 | DisCoVER | ----------------------------R-RGLGRRRKSWAKSHGFDYEYES--------EDLLKVMSVTAKNVVLGQIGE-AVFIFDIE-------------E----VATVIALHRK--VGTNVVVDLRLKGL--KEPR-ENDI--WL---------LGAIGPRMVYSTNLDAARRACDRRMVTFAHTAD-CAEIMWN-EQ--------------------NWTLVAMPV------TS-NRAQWDEGLRTVRQFNDLLR-VLP----P--V------------------------------------------------------------- | |||||||||||||
2 | 6ajfA | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | -------------------------GISLGNVTIGEDQKRAEVAAIPLV-------------IAGAGIMRLVTGLGI---AIDYGL--A--I---S----FFLKSI--AISVAA---FWGLVVMA---PMALILIVTTTVLMLAFGSVLPIK--------------AALMSALTLGSTMGILTWVLMAPMIGLIAVLDYELVRMVEARE---------IGTTLIAA--------------DLVMMKYLAFGLLIALLLDATIMFLPAVMKLLGDDCWWA-WMKRVQE-KEFNIFEMLRIEGLRLK-IYKYTILTKSPSLNAAKSELDKAG--- | |||||||||||||
3 | 6t84A | 0.11 | 0.06 | 0.53 | 0.97 | CEthreader | ----------------------------RRGLGRRRKSWAKSHGFDYEYESEDLLKRWKRGVMSTVGDVTAKNVVLGQIRGEAVFIFDIE-----------------EVATVIALHRKVGTNVVVDLRLKGLKEPRE----------------NDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNE---------------------QNWTLVAMPVT-------SNRAQWDEGLRTVRQFNDLLRVLPPVPQ------------------------------------------------------------------ | |||||||||||||
4 | 6t84A | 0.10 | 0.05 | 0.49 | 0.70 | EigenThreader | -----------------------------RRGLGRRRKSWAKSHGFDYE------YESEDLLKRWKRGVMAKNVVLG-QIRGEVFIFDIE-----------------EVATVIALHRKVG--TNVVVDLRLK---------------------GLKEPRENDIPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNE---------------------QNWTLVAMPVTSN-------RAQWDEGLRTVRQFNDLLRVLPPVPQ------------------------------------------------------------------ | |||||||||||||
5 | 6gmhQ | 0.13 | 0.11 | 0.81 | 0.67 | HHpred | --YVDCYLR-------LGAMARDKGNFYEASDWFKEALQINQDHWSLIGNLHLAKQE------WGPGQKKFE-------------RILKQSTQSDTYSMLALWHQPTRDR---------------------EKEKRHQD---RALAIYKQVLRNAAHKGYFREARDVFAQVREATADI--SDVISAVQMYENCLRKFYKHQLFKCGKLQECQLKARHVAPSDTVLMFNVALKD-EKSNLKEVLNAVKELELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRKQEQEKELLRQKL-----LKEQEEKKKLLEQRAQ-- | |||||||||||||
6 | 6gmhQ | 0.11 | 0.08 | 0.71 | 0.53 | MRFsearch | --QSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQ------------------VLRNDAKNLYAAN--------GIGAVLAHREARDVFAQVREAT-----DVWLNL---------AHIYVEQKQYISAVQMYENCLRKFYKH---------------------------QNTEVVLYLARAQECKQTLLKA---------------------DTVLMFNVAL-----SNLKEVLNAVKELELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR | |||||||||||||
7 | 1ciiA2 | 0.14 | 0.08 | 0.57 | 0.80 | FFAS-3D | --------LAVLDAQQARLLGQQTRNDRAISEARNKLSSVTES---------------------------------------------------------------------------------------LNTARNALTRAEQQLTQQKNTPDGKVSPEKFPGTTSAVIDNRANLNYLLSHSGLDYKRNI----------------------------------------LNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQ--RLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQ----- | |||||||||||||
8 | 6yx5B | 0.10 | 0.08 | 0.86 | 0.59 | SPARKS-K | ERDKPLLSPTAQKKFEEYQNKLANLSKIIREEWENGLRQIYKEMIYDAFDALGVE---MPKDM--------EVHFAG--------------------SLAKAQATEYSD-LDAFVIVKNDE---------DIKKVKPVFDALNNLCQRIFTASNPDPIGINPSRLIGVADVEATAMSILTEELRDKIKQFSNMVSAKKFYNKAIKDFTAPKEGAEVVSVKTHRPIDFMLMLREEFNLYSEDGAHLS-----APGTIRLLREKNLPEEQIARIESVYNQAMSKRFELHAEHKKE--HDEMPYSDAKAMLDEVAKIRELGVQRVTRIENLENAKK | |||||||||||||
9 | 1zumA | 0.08 | 0.06 | 0.75 | 0.74 | CNFpred | --DRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY---------------GKTIPID--GDFFSYTR----HEPVGVCGQIIPWNFPLLMQAWKLG-------PALAT----GNVVVMKVAEQTPLTAL-----YVANLI-------KEAGFPPGVVNIVPGF-------GPTAGAAIASHE-DVDKVAFTGSTEIGRV------RVTLE--LGGKSPNIIMSDA-----DMDWAVEQAHFALFFNQGQCC---CAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQ------------PQVDETQFKKILGYINTGK | |||||||||||||
10 | 6ajfA | 0.05 | 0.04 | 0.71 | 0.67 | DEthreader | -----------------GGVYGISLGNHVTGTIGEDQKR-A-----VAAIPLVAV----------AIIGGL---------------AIAGALGIM--RL-VAEFTPVAQVLIGIID-FWLV-VMA----MALILIVTTTVLMFLAFGSVVLPIK-A----------ALMS-A-LTLGSTMGILTLMAPMIGLIAVGLSYELVRMVEARE-------IGATTGITAAIL-----------SDLVMMKYLAFGLLIALLLDATIIRMFLVPAVMKLLGDDCWWA------QEKEFNIFEMLRIEGLRLIYDYYTKPSLNAAKSELDKAIGRNT-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |