Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VGVSWNTALYSVAVAGIIAYQLWVLSRSYRTEGVSGMLRQDWSAIGCMVPMMVGLPHAGMIRSGVYSLTMAASGAVMLYVQDAMRSGMSLKQVCAIGGGNLVLAVACLAGSKKLFMPGACGLSQRICVGLVVFVALLVVVSYAEKGRSGGKKYSSTVGSVVFVMTLAAVTLGSWVCGRD |
1 | 3rkoB | 0.09 | 0.07 | 0.77 | 1.01 | CNFpred | | -----LMWATLMLLGGAVGKSAQLP--------LQTWLADAMAGPTPVSALIHAA-----------TMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQT--------DIKRVLAYSTMSQIGYMFLALGVQ----------AWDAAIFHLMTHAFFKALLFLASGS |
2 | 3jacA | 0.07 | 0.06 | 0.88 | 1.00 | DEthreader | | GGGGG--G--GGGGGGGGGGGGGGG-GG-----G--GGGGGGGGGGGGGGGGGGGG-IFGFWAFGKHSAATDIASSLSDDQVPQAFLLFGTMVIDRALYLRKTVLGKLA-F-QV-V--LV-VAIHIWMFFILPAVTERMFSQNAVAQ-LW--YFVKCIYFALSAYQIRCGYPTRILFLT |
3 | 3gi9C | 0.09 | 0.09 | 0.96 | 0.67 | DisCoVER | | NKKLAVSMAVGVMIGASIF--SI-FGVGAKIAGRNLPE--TFILSGIYALLVASYTKLGAIVSNAGPIAFISIALLGLFIFAGIHSYVAVGMIFASAIFFLSY-MGFGVITNASEHIENPKKNVPRAIFISILIVMFGVAISAIGNLPIDLISENALIGALFSISSAM-NATIYGGER- |
4 | 4a01A | 0.09 | 0.09 | 0.94 | 1.00 | DEthreader | | FSEITGYGLGGSADLGSYAGIIGFVTEYYSYSPVLGKSVIIPIFAIAI-SIFSF------M-YGIAVAALGMLSTIATGLAIDGLAGNTTAAIGKGFAIGSAALVSLALFG--AFVSSITTVLSGVLAGSLVSGVQIAISASNTGGWGDTIGDPLKDTSGPSLNILIKLMAVESLVAFA |
5 | 4qi1A | 0.11 | 0.11 | 1.00 | 0.59 | CEthreader | | LGVEGEGIWLALGTIGMLLGMLYFIADGLDVQDKEFYVITILIPAIAAASYLSMFFGFGLTDVYWARYADWLFTTPLLLLDIGLLAGASQRDIGALVGIDAFMIVTGLVATLTKVVVARYAFWTISTISMVFLLYYLVAVFGEAVSDADEDTRSTFNALRNIILVTWAIYPVAWLVGTE |
6 | 3wmeA1 | 0.11 | 0.11 | 0.98 | 0.80 | EigenThreader | | SSSATMIVIGFIASILEGATFAIVFGRMFQVFTKWKYSVGIGVFEFIVAGSRTALFGIASERLASFSKLGFNLAQCVVGIIVAFIFAP---ALTGVLIALSPLVVLAGAAQRRRYISDGLFFGLSMLVIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVVTRGLGAGGEL |
7 | 6o84A | 0.16 | 0.09 | 0.61 | 0.30 | HHpred | | -------------------------------RLFSGLFGLNLMFLGGTVVSSVALSNKAVPERDSFLCILMLLSSVALYH--LLFIRNQNG-------------------AV---HHDHHAGAMWLKASLAIFGVCSIILSIFEIGHLLQNCEIDISIEIVFVS--------------- |
8 | 6cc4A | 0.17 | 0.17 | 0.98 | 0.48 | MRFsearch | | --YADRLMEFPSGVLGVALGTILSLSKSFASGNHDEYNRLMRLCFLLALPSAVALGTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHILGTMPWRLLRLMAVVLAGIAAYFAALAVLG-- |
9 | 6ob6A1 | 0.11 | 0.10 | 0.94 | 0.78 | FFAS-3D | | ---RYKAVWLIFFMLGLGTLLPWYFTNRLDMNSLSAIFNNVMTLCAMLPLLLFTYLNSFLHQRIRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLFTAAIMSGQGLAGFFASVAMICAIASGSE----LSESAFGYFITACAVIILTIIC--- |
10 | 6w2wA | 0.12 | 0.11 | 0.96 | 0.67 | SPARKS-K | | DPNVVAEIVYQLAEVAEILQEALRLAEEQGDEELAEAARLALKAARLLEEARQLLSKDPENEAACLKAVRAALEAALLALLLLAKHPGSAQDAVQLATAALRAVEAACQLAKQYPNSD--------IAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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