>PF07895 (234 residues) MTLEYIKKLMGWCPNAKAFETRRSVCPEYLEADNQSRGKDAGNSPVPSPGWWNKRHNRSL IDSSVFTLFSIYLIGFQGVSPVDERFMSGVILGIIFNLSLCIRTWSYLDDIKNSSRQRKI ITVSSKEKIIKLINIIIALVILYLLFSQFNWGFVLFLISAFCLIALLYYFKFDFSPMVFL FYLGSPNTVFSSGIAGICLTAFLYYLTDVYWEKRNGKIVLVYDRKMSEICIVNA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MTLEYIKKLMGWCPNAKAFETRRSVCPEYLEADNQSRGKDAGNSPVPSPGWWNKRHNRSLIDSSVFTLFSIYLIGFQGVSPVDERFMSGVILGIIFNLSLCIRTWSYLDDIKNSSRQRKIITVSSKEKIIKLINIIIALVILYLLFSQFNWGFVLFLISAFCLIALLYYFKFDFSPMVFLFYLGSPNTVFSSGIAGICLTAFLYYLTDVYWEKRNGKIVLVYDRKMSEICIVNA | |||||||||||||||||||
1 | 6ebuA | 0.07 | 0.04 | 0.62 | 0.77 | DisCoVER | -------NLELFRLINNARHPLLDVFFTHFAYLGSGYVLFPLLIFLFIFREKVKPLILAIMLETVLVISLKTNQP-RPAILLFPLHWRSF-PSGDTAMAFTIA-T--VL-----------SHGEKLHIKAIL---------------------------------------FYAFLIGYERI-YAGVHFPLDVFVGALIGIICGI-IS-----------L-------------- | |||||||||||||
2 | 6m2lA | 0.04 | 0.03 | 0.71 | 0.67 | DEthreader | FVFI-AV--CG-SGYLFGLVTVSVPYIKGAYGVTPYFSLIYPA---AS-VILGCLLSLQQFT--GINVLVSNSNELYKEFLDSHLITILSVVMTAVNFLM-TFPAIYIVEKLG-RKTLLLWG---------------------------------------------C--VLVALPTAIANNRSFVKILSIVATFVMIFAYGPVLWIYLHEFKDSAAAFIKETK--------Y- | |||||||||||||
3 | 5xamA1 | 0.08 | 0.07 | 0.83 | 0.48 | CEthreader | DQIQSVATINQRLFRDIQISGNFTPEEASQLALVLKSGALPIKIVTAAERYYGLWFGLVGALGLLFSSIIILGILGGFGATLTLPGIAGLVLTIGAAVDGNVISFERIKEELARGKG--IKNAIGAGYEHSTAAILDVNASHLLSALALYN-------------------------YSTGAVKGFAVTLIIGVIASTFSNLVFAKWFMQWLAQRRPNMSAP------------- | |||||||||||||
4 | 3j7jE | 0.08 | 0.08 | 0.94 | 0.62 | EigenThreader | YDLTTRIAHFLDPLLEFLSVKEIYNEKELLQGKLDLLSDTNMNLYSDDIPHALREKRTTVVAQLKQLQAETEPIVK----HGFRQEYLDTLYRYAKFQYECDAAMEDLTRLKETSSPLQSLQQRTWLIHWSLPHILRYLTTAVITNKDVRKRRQVLKDLQQESYTYKDPITEF---VECLYVNFDFDGAQKKLRECESVLVFCRIHWIVNLIRNDAKIDS-------KLGHVVM | |||||||||||||
5 | 5yd1A2 | 0.15 | 0.05 | 0.31 | 0.28 | HHpred | ------------------------------NVYNQE--YESA------AAFWPDVHGRVITALIISQLLLMGLLGTKHAA------SAAPF--LIALPVITIGFHRFCKGRFEPAFVR-------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5yd1A2 | 0.11 | 0.09 | 0.74 | 0.58 | MRFsearch | --ERELIDHAG-----------------------------------LDSVVYLRIYWLGLKIFAPIAMLAWAVLVPV----NSNRFWAHIIMAYAFTIWTCYMLMKEYETVANMRL--QFLASEGRKTIGMAIPMKATFFITYIMVDGWGVAGEILMLKPLIIYHLKNAFEEAMPQIQLYF----LLGLVYAPVTPMLLPFILVFFALAYVVYRHQIINVY------------- | |||||||||||||
7 | 6a2jA | 0.12 | 0.10 | 0.88 | 0.73 | FFAS-3D | --VMLIVLIGG--ALVTKTGSGQGCGRQ-------WPLCHGRFFPELNPASIIEWSHRFASGISIILVLSLAFWSWRKITPIFIFLFLQALLGGISLISFASVLILTLLIFEADKSVRTLVKPLQIGKKMQFHMIGILIYSYIVVYTGMGHRAAALLLFVWIIVACLIFITLQALSGIMIVYSELAFALAHSFFIACLFGVLCYFLLLIARFRYES------------------ | |||||||||||||
8 | 6v4dA | 0.06 | 0.06 | 0.93 | 0.74 | SPARKS-K | VWYMFWLLVS-----YESPAKHPTITDEERRYIEESIGESFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFLSAV-----PHLVMTIIVPIGGQIADFLRSKQILSTT--TVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNV-----NHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVFLIAALVHYG | |||||||||||||
9 | 3rkoB | 0.09 | 0.05 | 0.59 | 1.03 | CNFpred | -----------------------------------------------------MWATLMLLGGAVGKSAQTWLADAMAG---PTPVSALIHAATMVTAGVYLIARTHGLFLM-------------TPEVLHLVGIVGAVTLLLAGFAALV-QTDIKRVLAYSTMSQIGYMFL-------ALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC-------------------- | |||||||||||||
10 | 5jwgA | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | GMWLMQIQVRMKSLG-MQLEAADIYNPNSKDEITYEIKAYPGTNGKRGANWAIRRRS-LREIKLAQQQEVLAWAKQKG-I--A-TTEEAVRAISKAI--------------------------E--LMGIEMSNAFFSIYRRFEEFMKNP---DRDRLLRDSRFAASVAYEHQKLAKEVAAFDAPLAAAQRSYVASVLMK-LA-D---TY-GE--IKGYQP---RDVVTYGACA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |