Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GGLSSYILPAAAVGAMGYCYMWWKGLSLSDVMFVTKRNMANAVQSMSKQLEQVSSALAATKRHLTQRLENLDGKMDEQVEVSKTIRNEVNDVKDDLSQIGFDIEAIQQMVAGLEGKIELLENKQ |
1 | 6ewyA | 0.07 | 0.06 | 0.94 | 1.17 | DEthreader | | ---Q-RFDTFAAATYMNGSVSY--LSASEIATTAAK-TLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
2 | 6u0tA | 0.06 | 0.06 | 0.92 | 1.33 | DEthreader | | ----S--G-AKEFEG-EDL--AYDARIKYQKETQKQWIEQQIREKKMREEAERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKTR |
3 | 6eunA | 0.10 | 0.03 | 0.31 | 0.52 | DisCoVER | | EING-FK--AG--ETIYD--IDEDGTITKKDATVADDFK-GL--GLKKV--------------------------------------------------------------------------- |
4 | 3k29A | 0.10 | 0.09 | 0.85 | 1.17 | DEthreader | | --HYQKIRQLREQLD-D----------GTT-SDAIL-KKAYIKVVA-IQLSEEEEKVNKQKENVLAASKELERAEVELTKRRKEEEKTRLHKEEW-KEALKEEARQEEKEQDE-GQLLHQLHKQ |
5 | 6h3aA | 0.08 | 0.08 | 1.00 | 0.33 | CEthreader | | FMRDERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEG |
6 | 6ianA | 0.06 | 0.06 | 1.00 | 0.45 | EigenThreader | | IVKGGSVLTQLQQRNKALTDEAAKLKGTLADINLALEKSTTQTKLNQVNGEKRKQVDQLFLNAKEDKKRAAEVLRGILSKRQLKEELTKQCALLIKQVKTARGDIEVLERQVNETRDALSESKN |
7 | 2qa7C | 0.16 | 0.11 | 0.73 | 0.42 | HHpred | | ---------------------------------HLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRDTEKAQRSLSEIERKAQANEQR- |
8 | 6gaoA1 | 0.13 | 0.12 | 0.90 | 0.37 | MRFsearch | | ---IKLDGLGRQIADISNSISTIES---------RLGEMDNRLVGISSQVTQLSNSVSQNTQSLGDRINAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAALTTRVTTEVTRLDGLINSG |
9 | 5xg2A | 0.11 | 0.10 | 0.88 | 0.87 | FFAS-3D | | --------KERLKAEILTGEARLPG------LRERAENLRRLVEEKRAEISELERRLSSISFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGR- |
10 | 3na7A1 | 0.10 | 0.09 | 0.92 | 0.79 | SPARKS-K | | ----------LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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