>PF07888 (492 residues) KPLEDLVTLEEEPHGEEVGTGMLLVVPRAELLQSRLQECLRERAELLQVQEAASRQRERE KEEYKRAREAWDRRRKELEKDIARLQEELKQCREKIKEIERKQKEEQALGESLAQEKSAL LDAREASEVRIQELEEDIKTLTERTVERETELERMKERVKRAGAQRKEEESERKSLQTKL EQTEAELRSLSKEFQGLRNSLAQRDTSVLQLQNTITTLTQKLTTAHRKETESEAALKEMR SLRERLNTSERAAEGLKSDLSAMVAQRDHGQAELHQARLQAAQLTLQLADSSLALREGRA HWAQERQSLQRTAEKDHEHLEKLNAEMQRMEERLQEERMERVKLEVELGREKDCNRVQLS ETRRELQELKASLRVAQKEKEQLLAEKQELMEYICQLEQKMGTAASAKWSTALTASTGRP DSALSDSEDENPEALQPLRPPRPLGHYSLCEQGQPDSLLLTTPPPSPREMERSAVVINQP APLSSPHQAGAD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KPLEDLVTLEEEPHGEEVGTGMLLVVPRAELLQSRLQECLRERAELLQVQEAASRQREREKEEYKRAREAWDRRRKELEKDIARLQEELKQCREKIKEIERKQKEEQALGESLAQEKSALLDAREASEVRIQELEEDIKTLTERTVERETELERMKERVKRAGAQRKEEESERKSLQTKLEQTEAELRSLSKEFQGLRNSLAQRDTSVLQLQNTITTLTQKLTTAHRKETESEAALKEMRSLRERLNTSERAAEGLKSDLSAMVAQRDHGQAELHQARLQAAQLTLQLADSSLALREGRAHWAQERQSLQRTAEKDHEHLEKLNAEMQRMEERLQEERMERVKLEVELGREKDCNRVQLSETRRELQELKASLRVAQKEKEQLLAEKQELMEYICQLEQKMGTAASAKWSTALTASTGRPDSALSDSEDENPEALQPLRPPRPLGHYSLCEQGQPDSLLLTTPPPSPREMERSAVVINQPAPLSSPHQAGAD | |||||||||||||||||||
1 | 6z9lA | 0.13 | 0.10 | 0.80 | 2.17 | FFAS-3D | ---------------------------KEQVDTQAVDEQQKVVDQAQTDVNQQQAVVDEKAKETNAAKVQNEKDQQAVKQEQAKLEELAKNAEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKESKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVLEKAKTNVAEAQAIEQTSAKVLQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKTSTRSLSRLEEKALNELNKAEAAVVQAQEAYENSMKSLEELKEQQAVATLAYAQAQEDLSNAKLELQQYQGVLRDLE------------------------------------------------------------------------- | |||||||||||||
2 | 6yvuB | 0.10 | 0.10 | 1.00 | 1.42 | SPARKS-K | TKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLNISAEIIRHEKEVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKLLTYIKSEITQQEKGLESEIKDAETSCLSEDELRELDVELIESKINELSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNNAVQKRDEVK | |||||||||||||
3 | 5j1iA | 0.11 | 0.08 | 0.69 | 1.49 | SPARKS-K | ------------------------------------SRCQRCISELKDIRLQLEACETRTVHRLRLLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALS-----------PAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQS----GSESVIQEYVDLRTHYSELTTLTSQYIKFISET------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 6yvuA | 0.10 | 0.10 | 0.98 | 1.35 | SPARKS-K | EDVEEIKLQKEKELHKSK----------LENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVELKSHYYQTCKNYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDAIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKELFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKIIEDLDTYRERSKQLRKKVNPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKRETLVKTWEKVTLDFGNIFADLLPNSFA | |||||||||||||
5 | 5j1iA | 0.10 | 0.07 | 0.67 | 1.10 | CNFpred | ---------------------------RCQRCISELKDIRLQLEACETRTVHRLRL----------LDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAL-------------AAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQ-ATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQR-VEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-SQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLE-------------QSGSESVIQEYVDLRTHYSELTTLTSQYIKFISET----------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1sjjA | 0.10 | 0.10 | 1.00 | 1.32 | SPARKS-K | AIMTYVSSFYGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQEIKALLKKHEAFESDLQDRVEQIAAIAQELNEDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAPFNNWMEGAMEDLQEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIEDQLNHLRQYEKSIVPKIDQLEGDHQQIQVGWEQLLTTIARTINEVENQILTQMNEFRASFNHFDRKKTGMMDCEDFISMGYNMGEAEFARISIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN | |||||||||||||
7 | 5j1iA | 0.14 | 0.10 | 0.70 | 1.02 | MUSTER | ---------------------------------SRCQRCISELKDIRLQLEACETRTVHRLRL--PLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEA------------QAVPATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDV---EVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM--------SQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKV----QSGSESVIQEYVDLRTHYSELTTLTSQYIKFISET---------------------------------------------------------------------------------------- | |||||||||||||
8 | 2tmaA | 0.17 | 0.10 | 0.58 | 2.12 | FFAS-3D | --------------------------------------------------------------------------------------------------------------DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESE---RGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERA----EERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAET----RAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI---------------------------------------------------------------------------------------- | |||||||||||||
9 | 2tmaA | 0.14 | 0.08 | 0.58 | 1.08 | CNFpred | ----------------------------MDAIKKKMQMLKLDKENALDRAEQ------------------AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLE-----------------RAEERAELSEGKCAELEEEIKTV---------------------------------------TNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVT-----------KLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI----------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6z47G | 0.14 | 0.07 | 0.52 | 1.85 | FFAS-3D | ------------------------------------------------------------------------------QREIESLTQQFEEKAASYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMK-------------SQFERDLQARDEQNEEKRRQLLKQLHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSVNKAREEAIKQLRKLQAQM------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |