>PF07854 (344 residues) AGLFIILFLVLILPFRVRKIEENLEPFFLIMGIVAVTVSGLWSLELIIEALETPVRITEV MGIPVGIFQVVLIVGLIIHYYNKQVYSFLVAVLKKLGIKVFAFLVVTVFGLASSIISVIV SAVILAEIALVMPLERKSKVEFVVIACFAVGFGAALTPVGEPLSTIVVKKLNEDFFYLIE LVGEYIIPSVIILGIYAAMRVGGVSVKEIEIPEYTETLRTVVIRAVRVYVFIAALVLLGE GFTPIIYWYISKIPPEIIYWVNMVSAILDNATLAAAEIGPQLTELQIKGALMGLIISGGM LIPGNIPNIVVAGRLRITMGEWARIGVPLGLIMMTIFFVIIYVL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AGLFIILFLVLILPFRVRKIEENLEPFFLIMGIVAVTVSGLWSLELIIEALETPVRITEVMGIPVGIFQVVLIVGLIIHYYNKQVYSFLVAVLKKLGIKVFAFLVVTVFGLASSIISVIVSAVILAEIALVMPLERKSKVEFVVIACFAVGFGAALTPVGEPLSTIVVKKLNEDFFYLIELVGEYIIPSVIILGIYAAMRVGGVSVKEIEIPEYTETLRTVVIRAVRVYVFIAALVLLGEGFTPIIYWYISKIPPEIIYWVNMVSAILDNATLAAAEIGPQLTELQIKGALMGLIISGGMLIPGNIPNIVVAGRLRITMGEWARIGVPLGLIMMTIFFVIIYVL | |||||||||||||||||||
1 | 6wtwA | 0.10 | 0.10 | 0.97 | 1.33 | DEthreader | LWEFAIFVATIVGCITKPLPIGGTTLLGMVVTVLVGL----APVKDVQTGILSSFG--------NSAAWLIAMAFIMAHGISGLGNRVAYVMIEKFKSIGIGYAITGLELMMGALISNSARTGVTWPVVESISYDKKIGAYLDFMAFHANILSTALFITGAAPNLVAQQMAAQMSWSWFWAALVPVLVATVIIPLVIYKPPEVKETNWAKLMEVLDALHTAWNILIWLSILIFMAGKISYGAAKFIQSVHNWLVLVVLILLMFYTHYFFGHMALYLPFLTVTLGLSAMLLAFTGVINASTTHYANGPASILATTGYVKQSEWWKMNFILGLIYMVIFGIVGTIK | |||||||||||||
2 | 6wtwA | 0.12 | 0.10 | 0.81 | 1.00 | DEthreader | --------------------------------------D-----------------------S--WLI-MAFIMAHGISTLGNRVAYVMIEKFG-KRSIGIGYAITGLELMMGALISNSARTGGTWPVVESISYSRKIGAYLDFMAFHANILSTALFITGAAPNLVAQQMAAMSWVSWFWAALVPVLVATVIIPLVIYKPPEVKETPNAWKLMIEMVLSEDALEGAWNILIWLSIIFMGKSGAWFAKFIQSVWVLVVLILLMFYTHYFFAGTAHMALYLPLTLGLSAMLLAFTGVINASTTHYANGPASILATTGYVKQSEWWKMNFILGLIYMVIFGIVGTIK | |||||||||||||
3 | 6wtxC | 0.15 | 0.14 | 0.95 | 2.29 | HHpred | -VLGISMLAFIAVLWLTE----ALHVTVAILVPVMAVFFGIFETQAALNNFANSI-IFLFLGGF--ALAAAMHHQGLDKVIADKV----LAMAQGK-MSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKRVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMFGLPTAMMMLPMAIAILYFL-LKPTLNGMFELDRAPVNWDKGKVVTLGIFGLTVFLWIFRVHWKEIQKNALSDMGIFVVATFVFLTEFASNTASAALLI-PVFSVLLSVLIAVAASC-AFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
4 | 6okzC | 0.14 | 0.13 | 0.94 | 0.84 | DisCoVER | RNSLIVLADVALFLALYHFLPFEHNVVLGISMLAFIAVLWLT----E---ALHVTTAILVFANIFLFLGGFALAAAMHHQ--GLDKVIADKVLAMAKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGL---SFTDWMKFGLPTAMMMLPMAIAILYLLKPTNWDKGKVTLVVHWKEIQKT--ADGVLLLFGGGLC-LSNVLKQTSVLAVILVVATVVFLTEFASNTASAALLIPTVAPVLLSVLIAVAAS-CAFMLPVATPPNAIVFSGH-IKQSEMMRVGLYLNIACIGLLTAIAM-- | |||||||||||||
5 | 6wtxC | 0.13 | 0.13 | 0.97 | 0.52 | MRFsearch | --NVVLGISMLAFIAVLWLTEALHVTVTAILVPVMAVFFGIFETQAALNNFANSIIFLFLGGFALA---AAMHHQGLDKVIADKVLAMAQG-----KMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLKQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTLNGMFELDRAPVNWDKGKVVTLGIFGLTVFLWIFSSGTSVFLANALSDMILVVATFVVFLTEFASNTASAALLIPVFASPVLLSVLIAVAASCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
6 | 6okzC | 0.14 | 0.13 | 0.98 | 1.67 | SPARKS-K | LIVLADVALFLALYHFLPFEHNVVLGISMLAFIAVLWLTEALH---VTVTAILVPVMAVFFNFANSIIFLFLGGFALAAAMHHLDKVIADKVLAMAKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPT--NWDKGKVVTLGIFGLTVFLWIVLLLFGGGLCLSNVLKQTSVFLANALSLVVATFVVFLTEFASNTASAALLIPVFAPVLLSVLIAVAAS-CAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
7 | 6wtxC | 0.13 | 0.12 | 0.98 | 1.21 | MAPalign | -RNSLIVLADVALFLALYHFLNVVLGISMLAFIAVLWLTEALHVTVTAILV---PVMAVFFGIALSIIFLFLGGFALAAAMHHLDKVIADKVLAMAKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLKQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYKPTLNGMFARVVHWKEIQKT--AWGVLLLFGGGLCLSNVLKQTTSVFLANALSFVVILVVATFVVFLTETASAALLIPVFATVAPVLLSVLIAVAASC-AFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
8 | 6wtxC | 0.13 | 0.13 | 0.97 | 0.93 | CEthreader | EHNVVLGISMLAFIAVLWLTEALHVTVTAILVPVMAVFFGIFETQAALNNFANSIIFLFL---GGFALAAAMHHQGLDKVIADKVLAMAQ-----GKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTLNGMFELDRAPVNWDKGKVVTLGIFGLTVFLWIFSSPINALSDMVSHMVILVVATFVVFLTEFASNTASAALLIPVFATVLLSVLIAVAASC-AFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
9 | 4f35D | 0.13 | 0.12 | 0.94 | 0.86 | MUSTER | NVVLGISLAFIAVLWLTEAL-----VTVTAILVPVAVFFGIFETQAALNNFANSIIFLFLGGFALAAAHHQ---------LDKVIADKVLAAQGKSVA-VFLFGVTALLSWIS--NTATAALPLVLGVLSKVDKQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSAIAILYFLGKVVTLGIFGLTVFLWIFSSPINAALGGFKSFVVHWKEIQKTAWGVLLLFGGGLCLSNGTSVFLANALSDVSILVVATFVVFTEFASNTASAALLIPVFATVLLSVLIAVAASCAF--LPVATPPNAIVFASGHIKQSE--RVGLYLNIACIGLLTAIALFW | |||||||||||||
10 | 6wtxC | 0.15 | 0.15 | 0.95 | 4.08 | HHsearch | VVLGISMLAFIAVLW----LTEALHVTVAILVPVMAVFFGIFETQAALNNFANSI-IFLFLGGF--ALAAAMHHQGLDKVIADKV----LAMAQGK-MSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKQVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMFGLPTAMMMLPMAIAILYFL-LKPTLNGMFLDRAVNWDKGKVV--TLGIFGLTVFLWSFRVHWKEIQKNALSDMGILVVATFVFLTEFASNTASAALLI-PVFSVLLSVLIAVAASC-AFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |