>PF07847 (215 residues) LLDEIRPIDVGLDNEAQIARNWNNSTRQPNGRRGRNGANQFTSPIKYLHIHESESFSMGI FCMPPSSVIPLHNHPGMTVLSKLLYGTLHAESYDWIDVTDPTDQLQELSVRPARLVRDRE MSAPETTILYPNRGGNIHTFRAITPCALFDVLSPPYSAEKGRDCSYFRKSSVREPPPVVL PGEINSAEVIWLEELEDHQPPEGFVVARGLYKGPS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LLDEIRPIDVGLDNEAQIARNWNNSTRQPNGRRGRNGANQFTSPIKYLHIHESESFSMGIFCMPPSSVIPLHNHPGMTVLSKLLYGTLHAESYDWIDVTDPTDQLQELSVRPARLVRDREMSAPETTILYPNRGGNIHTFRAITPCALFDVLSPPYSAEKGRDCSYFRKSSVREPPPVVLPGEINSAEVIWLEELEDHQPPEGFVVARGLYKGPS | |||||||||||||||||||
1 | 6sbpA | 0.53 | 0.45 | 0.86 | 1.17 | DEthreader | LLEKIKPSDVGLEQ-EA--L--N------------------LPAIKYLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPDQSELDDP-LQARPAKLVKDIDMTSPPATTLYPTTGGNIHCFKAITHCAIFDILSPPYSS-THGRHCNYFRKSPMLDLPGEIEVISN---VTWLEEY---QPPDNFVIWRVPYRGPV | |||||||||||||
2 | 6sbpA | 0.44 | 0.36 | 0.83 | 1.00 | DEthreader | ILLKIKPSDVGLEQ-EA-LV---W-----------------LPAIKYLQLHECDSFSIGIFCMPPGSIILHNHPG-MTVLSKLVYGSMHVKSYDWAEPQ-EL-D--DPLQARAKLVKDIDMTSPPATTLYPTT-GNIHCFKAITHCAIFDILSPPYSST-HGRHCNYFRKSPMLDLPGEI--VIS-NVTWLEEYQ----PPDNFVIWRVPYRGVI | |||||||||||||
3 | 6sbpA | 0.56 | 0.50 | 0.89 | 9.76 | HHpred | VLEKIKPSDVGLEQEAQLVRNW-------------------LPAIKYLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPDQSE-LDDPLQARPAKLVKDIDMTSPSATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRHCNYFRKSPMLDLPGEIVMNGEVISNVTWLEE---YQPPDNFVIWRVPYRGPV | |||||||||||||
4 | 3elnA | 0.13 | 0.09 | 0.70 | 0.88 | DisCoVER | VQAVLEAYESNPWALYA-KF-D-------------------QYRYTRNLVDQGGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDW---------PDKK-SNEMIKKSERTLRENQCAYIND-SIGLHRVENVSEPAVSLHLYSPPF------DTCHAF----------DQR---------TGHKN-KVT----M-TFHSKFGIR- | |||||||||||||
5 | 6sbpA | 0.55 | 0.49 | 0.89 | 1.22 | MRFsearch | -LEKIKPSDVGLEQEAQLVRN-------------------WLPAIKYLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPD-QSELDDPLQARPAKLVKDIDMTSPPATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRHCNYFRKSPMLDLPGEIEVMGEVISNVTWLEEYQ---PPDNFVIWRVPYRGPV | |||||||||||||
6 | 7cxzA | 0.44 | 0.39 | 0.90 | 4.03 | SPARKS-K | VLDEIKPEDVGVNPKMSYFRS---------------TVTGRSPLVTYLHIYACHRFSICIFCLPPSGVIPLHNHPEMTVFSKLLFGTMHIKSYDWVPDSPQ----PSSDTRLAKVKVDSDFTAPCDTILYPADGGNMHCFTAKTACAVLDVIGPPYSDPAGRHCTYYFDYPFSSFVDGVVVAEEEKEGYAWLKERE--EKPEDLTVTALMYSGP- | |||||||||||||
7 | 6sbpA | 0.52 | 0.45 | 0.86 | 0.92 | MAPalign | -LEKIKPSDVGLE-------------------QEAQLVRNWLPAIKYLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPDQ-SELDDPLQARPAKLVKDIDMTSPSATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRHCNYFRKSDLPGE--IEVMNGEVISNVTWLEEYQP---PDNFVIWRVPY---- | |||||||||||||
8 | 6sbpA | 0.55 | 0.49 | 0.89 | 0.67 | CEthreader | VLEKIKPSDVGLEQEAQLVRN-------------------WLPAIKYLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPDQS-ELDDPLQARPAKLVKDIDMTSPSATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRHCNYFRKSPMLDLPGEEVMNGEVISNVTWLEEYQ---PPDNFVIWRVPYRGPV | |||||||||||||
9 | 3ussA | 0.18 | 0.14 | 0.81 | 1.21 | MUSTER | LLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRY----QQYLLHVDQRFSVVSFVWGPGQITPVHDH-RVWGLIGMLRGAEYSQPYAFDAGGR-----------PHPSGARRRLEPGEVEALSPRIG-DVHQVSNARTSISIHVYGANIGA---VRRAVFS--AEGEEKPFISGYSNSRLPNIW----DLSKE--------------- | |||||||||||||
10 | 7cxzA | 0.43 | 0.39 | 0.89 | 5.96 | HHsearch | VLDEIKPEDVGVNPKMSYFRST---------------VTGRSPLVTYLHIYACHRFSICIFCLPPSGVIPLHNHPEMTVFSKLLFGTMHIKSYDWVPDSPQP----SSDTRLAKVKVDSDFTAPCTSILYPADGGNMHCFTAKTACAVLDVIGPPYSDPAGRHCTYYFDYPFSSFSVDGVVAEEEKEGYAWLKERE---EPEDLTVTALMYSGP- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |