>PF07816 (190 residues) AEELFDGGKIRPFRPPPRSPRKKKEIDTFATEVENTRERTKNDRGRERVSSLSSSNSGRR GARSLSPHRVSKYPWEEEQQLQQKTEKKSPISSKPALSSTTSKGCKKWSLKDFFLFRSAS EGRAADRDPLKKYIALFKRREEVKSSSVRSIEGSNSGSNSKRRGPISAHELHYTVNRAVS EDLKKKTFLP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | AEELFDGGKIRPFRPPPRSPRKKKEIDTFATEVENTRERTKNDRGRERVSSLSSSNSGRRGARSLSPHRVSKYPWEEEQQLQQKTEKKSPISSKPALSSTTSKGCKKWSLKDFFLFRSASEGRAADRDPLKKYIALFKRREEVKSSSVRSIEGSNSGSNSKRRGPISAHELHYTVNRAVSEDLKKKTFLP | |||||||||||||||||||
1 | 4qnlA4 | 0.08 | 0.05 | 0.59 | 0.58 | DisCoVER | VRPGDLTQVGLSKCVTNENVTTTVWCEEEG-TV--SL--LEPWTNAA-V-VGQSHNIRVESPVARNTQINRTVLNG-KT-ASY-FGGGKTLTTYGRLR----KGLNFIRYIIDGSPTDAYF-----------------------------------------------P---------------LKFGS- | |||||||||||||
2 | 1bxrA | 0.03 | 0.03 | 0.79 | 0.67 | DEthreader | CFDYSAQA-----------MGGSGGIIGWKEYEMMMASMAVLRGVEGGSNVMNPR-V-SRSSALASK--PIAKVAAKLAGYTLDELMNRTPASFEPSIDYV--------P-MSVGEVMAIGESLQKALRGLEPNGFDYCCHASLRTDYD------------TSDRLYFEPVTVVYGGRAARTTGEV---- | |||||||||||||
3 | 4xpuA | 0.10 | 0.09 | 0.87 | 0.48 | CEthreader | ADVGFEQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAV------------------------ | |||||||||||||
4 | 2tmaA | 0.07 | 0.07 | 1.00 | 0.58 | EigenThreader | ASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD | |||||||||||||
5 | 1dvoA | 0.18 | 0.08 | 0.47 | 0.31 | HHpred | -PGLFDGDTPRLLACGI-------RDV-LLEDVAQ-------------RNIPLS----------------------H------------------------------KKLRRAMKAITR------S----ESYLCAMKAG------ACR-YDTEG-----YVTEHISQEEEVYAAERL--DKIRRQN--- | |||||||||||||
6 | 4rwtD | 0.22 | 0.12 | 0.56 | 0.75 | MRFsearch | -------GYDPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQGSGSG---------------GSVGSQPNSILKEIKNSLR---------------------------------------------------SVQEKKMEDSSRPST-----------PQRSAHENLMEAIRGSSIKQLKRVEVP | |||||||||||||
7 | 5x6oG | 0.13 | 0.12 | 0.87 | 0.37 | FFAS-3D | -DDI----GTRPPRFTQIPPSSAATQIPTTLEVTTTTLNNKQSKNDNQVNQLNKAQG------EASMLR-DNIEREKEKNIQAVKVNELVKHLQELAK------------LKQELQKLEDEKKFLQRGKSKREVITNVKPPSTTLNTITPDSSSVAIEAKPQSPQSKKRKISDNLLKKNMVPLNPNRIIP | |||||||||||||
8 | 6y5qq | 0.11 | 0.09 | 0.89 | 1.21 | SPARKS-K | ------VEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLK-----GDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLRVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF---------DRHPDGVASVSFRDPEEADYCIQTLDGRWFGG | |||||||||||||
9 | 3dy5A | 0.16 | 0.04 | 0.26 | 0.36 | CNFpred | --------------------------------------------------------------------------------------------------------FKEVNLQDYHLPNALKKRGVDDPSKLPGFYYRD------------------------------GLALWEAIETFIGEIIA------ | |||||||||||||
10 | 4iw0A | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | ----------------------S--EETTTR-HKV-----G---Y--E---RAVLRKDEYKITGKPSGAISSGDMRQVLTHLYKQTKIISNQELRLVRIDD-NETHKTEVVITLDFCIRNIEVHT-LRLSSSQGTIETSQDIDSRLGSLADWAHQE------EWKMLH-LRKQLLSLTNQCFDIEEESKE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |