Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | LSRKEIEEDFIAMTGKKPPRKPKKRPKIIQNELDAVFPGLWLSEVHPDRY |
1 | 4bjqA | 0.00 | 0.00 | 0.26 | 0.78 | DisCoVER | | -----RWKALANALNIPL-------------------------------- |
2 | 6cptA | 0.07 | 0.06 | 0.86 | 1.00 | DEthreader | | EIATNQLIYLYRLMIAFIVRTYFHGEFAEVELLKSVIK-KD--ID-D--- |
3 | 4uobA | 0.18 | 0.18 | 0.98 | 0.56 | CEthreader | | DGPDGIEATLKSAGGGLSRMKAD-YIYGILAHLQEHHGGLSLRFLREFPH |
4 | 2c2nA2 | 0.11 | 0.10 | 0.94 | 0.55 | EigenThreader | | FSV-GEFAALVFA--GAMEKIRAEAMQEASEAEALRFLQKNSSKFHFRRT |
5 | 5a48A | 0.12 | 0.10 | 0.82 | 0.28 | HHpred | | ITISSIKSEYRKLTGNPFPLHDN-----VTD-FLLTIPNVTAEC-SES-- |
6 | 3qmzA | 0.14 | 0.10 | 0.74 | 0.58 | MRFsearch | | ---RQRRDDLLKIIGSG------KHHDQVSKFMKKMFGSDFITGVR---- |
7 | 5a1uE1 | 0.19 | 0.16 | 0.84 | 0.32 | FFAS-3D | | LEKSAVLQEARVFN--ETPINPRKCAHILTKILYLINQGEHLGT------ |
8 | 2vrgA | 0.12 | 0.12 | 1.00 | 0.90 | SPARKS-K | | LDGLELSTAITHVHKEEGSEQAPLMSDELINIIDGVLRDDDKNNDGYIDY |
9 | 1h41A | 0.09 | 0.06 | 0.70 | 0.40 | CNFpred | | ISAATAADEWLRMTFS--------NQPAFIEPVKQMMLVSREA------- |
10 | 3gv0A | 0.11 | 0.10 | 0.88 | 1.00 | DEthreader | | -GFTSQ-VFGITEVLGVIISKIFSFHDHARKGFNRGIRGL-T--EFPIV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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