>PF07795 (236 residues) KSMEELRQSLIYTTLELEQTRAAVQDELRKRDDQLLNLKDLLSKTMRERDEAQEKCQRFL LEKLVFQQQQQQVAAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLPQPQ PQPQLPQVTQSMIELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESF EIPPVTIPSPPPQPQLLHQDSFVNGSSTTTNCGRVSRKRVFSDGSGSPTETKYQRL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KSMEELRQSLIYTTLELEQTRAAVQDELRKRDDQLLNLKDLLSKTMRERDEAQEKCQRFLLEKLVFQQQQQQVAAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLPQPQPQPQLPQVTQSMIELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPPPQPQLLHQDSFVNGSSTTTNCGRVSRKRVFSDGSGSPTETKYQRL | |||||||||||||||||||
1 | 1ciiA2 | 0.06 | 0.04 | 0.68 | 0.64 | DisCoVER | ALAVLDAQQARLLGQQNDRAISEARNKL---SSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEK-----FPGRSSTNDSIVVSGDPRFAGTIKITTSAVIDNIAEVAEWDKLRQRLLD--------AR------NKIAESAVNSARNNLSART-NEQANALLL--------------KEKIRNQ-------------------------LSGINKIEK------------- | |||||||||||||
2 | 2xvgA2 | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | RTGKSV-ML-PKWAYGFW-QSSEIIQNLKEYRDRKIPI-DN--IV--L---DWSYWPEAWGSHFYTNYKELAKEATAFWLAVEPDFEKRKWLMTN-G-IFNAGFGIIWSGDI---------HGFVGSWTVQELNTR--QFGAFVPLYR--S--HGQ-----------------------MWYLRLIYLGDH---VDEGNSPLLITV-----F---IYEDDGLKYQQGEW-SRIRMA | |||||||||||||
3 | 3tnfB | 0.08 | 0.08 | 1.00 | 0.59 | CEthreader | KDLEDKYKTYEENLEGFEKLLELSLSEINEKMEAFSKDSEKLTQLMEEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEETINNLIMSTDPKENEEATKLLHKHNGLNLKLANLQ-DMLAVHRKEKSFFNEKGEEVTSLNDAHYVIGKDQQLFNLGGKFY | |||||||||||||
4 | 5x59A3 | 0.06 | 0.06 | 0.91 | 0.55 | EigenThreader | MQGYDDCMQD------VNMEAAYTSSLLGSIAGVGQSIFYRLNGVFNQALGAMQTGDAVNNNAQALSKLASELSNTFGAISASIGDIIQRLDVLEQDAQIDRLINGRLTTLNAFVAQQLVRSESAALSAQLAKDKVNECVKAQSKRSGFCG--QGTHIV-S---FVVNAPNGLYFMHVGYY------PSNHAYGLCDAANPTNCIAPVNGYF---IKTNNTRIVDEWSYTGSSFYA | |||||||||||||
5 | 6h9xA | 0.16 | 0.13 | 0.81 | 0.33 | HHpred | RALEERRKVLQVQTENLQAERNSRSKSIGQARLEVNKLGEQLDAAKSELETLLAEIRDIALA---IPNIP--HDDVPVGR----DENDNVEVSR-WGT-----------PRQFD-F-------EVRDHVTLGEMGLTGSRFGQLARLHRALAQHGPYLVTLYGTGQLPKFAG---DLFHTRPSNYALIPTAETNLVRDEIIDEDKMTAHTPCFRLIRMHQFD-------------- | |||||||||||||
6 | 4rsiB | 0.12 | 0.06 | 0.47 | 0.40 | MRFsearch | -HKQELQDLILDLKKKLNSLKDEGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSG-----------------------------------------------RINGFHGRLGDLGVI-----DDSFDVAISTACPRLDDVVV------------------------------------------------------------------------- | |||||||||||||
7 | 6j5tG3 | 0.13 | 0.11 | 0.80 | 0.60 | FFAS-3D | -FLEKTLNILEEKGRQLEDLQSEMQSFLKDAENETLRVADLRELVYEAEDILVDRLQEINERITKIKSQVEPYFEFITPDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLN--SDLAKKFTDCKYLRVDAPLSEILDEIASLLACLSLSNQFPRSMEDLHNLQILDASYCQNLKQLQ-------------------------------------------- | |||||||||||||
8 | 3jc8Na | 0.08 | 0.06 | 0.78 | 0.88 | SPARKS-K | VLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPV-----RMMDALASATPKKVWVKTFSENNNAVSIDGSAVSHDGVVWTPKGMGRLVDRRRDSKTAR----------------------------------------------VEMLTSDATIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKIT | |||||||||||||
9 | 4tqlA | 0.11 | 0.06 | 0.56 | 0.51 | CNFpred | ELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMD-DELLEKIKKNIDDLKKIAEDLIKKAEENIKEA---------------------KIAEQLVKRA--------KQLIEKAKQVAELIKKIL-------------------------------------------------------------------------- | |||||||||||||
10 | 2dfsA | 0.07 | 0.04 | 0.52 | 0.67 | DEthreader | CYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGW-LARVHYTLIVLQCYRRM-----K--------M--NL-ITYST-----------------------------------------------------------------------------------HA---TEMEKLEETKQLELDLNDER---------L-RYQ- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |