Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | DAVSPVIGVILMVAITVILAAVIASFVLGLGDQAQQATPQASFSWDYEQDDPSHTTGNVTITHDGGDSIEAQQLYIRGDF |
1 | 5o4uA | 0.08 | 0.07 | 0.99 | 1.17 | DEthreader | | -IGIVFIAMVLVAAVAAAVLIQTSGYLQQKSQATRETQESGIKVLVVGKTDNKTYVEKLAIYISPGIDLNNTRVVLSNIK |
2 | 1cz7D | 0.07 | 0.06 | 0.94 | 1.17 | DEthreader | | QTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVLRGRFESTVELQSDAQAKMQQIFSFDQEMTLMFASVNS----- |
3 | 6navA | 0.21 | 0.19 | 0.91 | 1.07 | MRFsearch | | ---SGAVTALILVIASVIIALVVVGFAFGLFGAFTGQGTVTQVGTATLSA----STGTLKVTLKNGATTQVTGAIINGNA |
4 | 6navA | 0.21 | 0.20 | 0.94 | 1.35 | HHsearch | | --LSGAVTALILVIASVIIALVVVGFAFGLFGAFT-GQGTVTQVGTATL-SASTGTLKVTLKNTGATT-QVTGAIINGNA |
5 | 3kbuB | 0.11 | 0.10 | 0.90 | 1.00 | DEthreader | | LGIIRLQGQVDKHYAGLKDVACERKRKLENMYHLFQKRDEQSELSSPEMGQDFDHVTLRKF--------ETAIGLIDMQL |
6 | 4mz0A1 | 0.13 | 0.12 | 0.94 | 1.00 | DEthreader | | LKQEQEKEQSLSALQRALIALKDARSKLEKYETQSKEPITGVFII-S-YLLTSE--GNAPATGSGP-NLAVETSSVNLLL |
7 | 6navA | 0.22 | 0.20 | 0.93 | 0.78 | HHpred | | --LSGAVTALILVIASVIIALVVVGFAFGLFGAFT-GQGTVTQVGTATL-SASTGTLKVTLKNTGATT-QVTGAIINGN- |
8 | 6navA | 0.16 | 0.15 | 0.91 | 0.77 | DisCoVER | | ------SGAVTALILVIASVIIALVVVGFAFGLFGAFTGQGTVTQVGATLSASTGTLKVTLKNTGATTISAGQSTYSIS- |
9 | 5o4uA | 0.16 | 0.15 | 0.94 | 0.77 | MRFsearch | | -----GIGTLIVFIAMVLVAAVAAAVLIQTSTTQEVASGIKVLSVVGKTDSNKTYVEKLAIYISPSEGIDLNNTRVVLSN |
10 | 4indA2 | 0.10 | 0.10 | 1.00 | 0.65 | SPARKS-K | | QSVTLSGSQVTQSILNVQGSGSHLRLKYASVSGLTTAVTQCQLQATNLNRSTTYSTNSIQLVANGGSSTSSVTITLILVY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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