Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MYQWKENRKTGTKTGADGKKKKKTTYSYEKVWSSARQDSAGFKKRAGHENPAAFPYESRTVTAKNVTAGAFDLPESWVSGMGGWKKMSAADLKQAMPKGAPDGLILTDEGIFIGKDPKNLKIGDIRIRYEKVAPGPVTIIAAQKGKSFVPYQMKQGEIKEFRTGSMTADQVLGEARKSNAAMGWVLRLAGFLAMFIGLAMMFKPISVVLDVIPFLGNLAGKGATLISFLLAAGFALFTIAIAWFFYRP |
1 | 6wvgA | 0.07 | 0.06 | 0.82 | 0.77 | DisCoVER | | VVPILVELDGD-------VNGHKFSVRGEGEGDAGKLTLKFICTT-VTTLV--QCF-SR-Y-PDHMKRHDFFK---------------------SAMPEGYVQERTITYKTRAEVKFEGDTLVNIELKGIDGCCILGFGIYLLIHNNFGVLFHNPSLTLGNVFVIVGSIIMTKAAWDSI--NS--HNVYIT--ADKKNG-IKANFKIRHNVEDGSVQLADHYQQNTPPVLLP-DNHYLSTQSVTAA-- |
2 | 3cfrA | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | | ------------ENMYG---PVQPYPGAFVKSF---LHDYISPNGMMFMAWIRKEYNAFVL----SIYVS-----------DTNHDFLDK-F------------AR--ERMEPDRF-QHLMF-MDREAIAGPLGSKGIGGFWTGKKMGLETTPKAKALKCRRLQEGE--ESLQEYFKEFEKEFRQL-NYISIAS--V--SS-ANNIAKY-----DVGGFIILTYRAVFDKCWMDYTVLLEKFIKPLYE |
3 | 5mrwA | 0.09 | 0.09 | 1.00 | 0.52 | CEthreader | | QGALQNFLPYQAVNTVEGAQQLLPMGPVIKMLGTNGGGFFNANSSHPFENPAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEMEGKESRFGVLVSSLFAVVTTAASCGAVGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAASPFWNCLLAFCMFVGRF |
4 | 4wsbB | 0.07 | 0.05 | 0.79 | 0.78 | EigenThreader | | SMEVTTHFQKKKRIRD-NMITQRTIGKKRVKLTKDAE-------------RGKLKRRAIATPGQSGYTITGDNTKAPIMFSNKVARLG-------------RGYMFESHLRTQISDINLRYFNLMVEGTASLSPGMYWWDGLQSSDDFAL--------IINGHFKEDIQQGVNHFYRTCKLILEDERIYQKCCQVFEKFFMLSRARIDARIDLESFSEITNTCKAIEALK------------------ |
5 | 3syaA | 0.16 | 0.06 | 0.40 | 0.29 | HHpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------QRYVRKDGKCNVHHGNVRETYRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYTPCVTGPEGIILLLIQSVLGSIVNAFMVGCMFVKIQP |
6 | 6wvgA | 0.20 | 0.06 | 0.33 | 0.23 | MRFsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------HKLEYNMGMSSLKLLKYVLFFFNLLFWICGCCILGGSIIMVVAFLGCMGSIKELLMSFFILLLIILLAEVTLAILLFVYEQ |
7 | 2bg9E | 0.08 | 0.08 | 0.92 | 0.60 | FFAS-3D | | VTLKLTLTNLISLNEK--EEALTTNVWIEIQWNDYRLS----WNTSEYEGIDLVRIPSELLWLPDVVL-------------ENNVDGQFEVAYYANVLVYNDGSMYWLPPAIYRSTPFDWQNCSLVFRSQTYNAHEVNLQLSAEEGIDPEDFTENGEWTIRHRPAKKNYNWYIINIIAPCVLISSLVVLVYFLCTLSISVLLAQLFLIAQKVPETSLNVPLIGKYLIFVMFVSLVIVTNCVIVLNVS- |
8 | 6w98A | 0.11 | 0.11 | 1.00 | 0.67 | SPARKS-K | | AINLGDGPQLRSIDPKADVITDTITVTVTDWTDIIDRTALGDADHRPIAPADNAANSKRKITIGILALVPMSITRELLDGTVDTSPIATGAGIQDVTVNPSQQFIVDGVQLTAAATKGAWGPDRREVTAEPSAHERVLAVPESINPGWA-ARDAQGRVWVLPAGDGLLPILACLALCAGPAAGVAVLAALTAISISGMAVGLAALAFKVWVTAAGVYLAGGSLLLAGAALIQLLALISVASVALAAVR |
9 | 5oqtA | 0.07 | 0.02 | 0.33 | 0.73 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSG |
10 | 6xmpA2 | 0.06 | 0.04 | 0.72 | 0.83 | DEthreader | | ---------VP----------E-QRVTEQFFQKKRFLWHENEQ--------PKFLVDEPD-------------------LSGEHGGTKALQVTPPEHKSDIPPPP----LAIV-----------TKTGTSQ----TGTLTIMIVTRVKLL-L--YQTLMCGALLNGT-LANVSAVTNIIRQGRCALVNTIQMYKILALNCLISAYSLSIIVLNTGIFIIQLVQQVSTFAVNYQGEFHKFFMDDKPSSV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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