Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | RIVAIDIVRGIALIAMASYHFTWDLEFFGYTDPGLTAFGLWKIYARCIASTFLFLVGVSLYLAHGRRIRWNGFWKRFAMVAGAAIAISVVTRIATPDGFIFFGILHEIALASLLGLLFLRLPALLTLVVAALVIAAPVYLRLEAFDHPWLLWVGLSATSPRSNDYVPLFPWFGAVLLGIAAAKLASASGVRARLASLTPGRWANPLVFIGRHSLAFYLIHQP |
1 | 3rkoB | 0.07 | 0.06 | 0.95 | 1.23 | CNFpred | | --MLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLM-----TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVQNIFKMGGLRKSIPLVYLCFLVGGAAAGFFSKDEILAGAMANGHINLMVA-----GLVGAFMTSLYTFRMIFIVFH |
2 | 6eyuA | 0.08 | 0.07 | 0.86 | 0.72 | DisCoVER | | VYAITGSQFIYIITAMSGLLFLYLPRKLDVPQKFGIIH--FFIVVWSGLMYT-NFLNQSFLSDY---AWYMDWM--VSTPL-ILLALGLTA----FHGADLLGALLGAE--FTLVITGLLASITPYYVGVLLLLGVVYLL----AKP--FREIAEESSDGLAAYKILAIGIFLSYPTVWY--------IS--GIDALPGLDPTQTSIALVVLFCKQGDMYI- |
3 | 3jbrA | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | | KAMLPLFHIALLVLVVYQCITMEGW--TDVLYWVNNPWIYFVTLILLGSFFILNLVLGVLSGEFTKERKASFLAIAVDN-----FVSTFEGWPQLL--------AFMMNIFVGFVIVTFQEQGETESQALPYVALLIVMLFFIYAVAVLLFRCAEAWILFIYMCAFLINLFVAVIMDNFYLTRDWSI-LGGGG----------------------------- |
4 | 6gyhA | 0.07 | 0.07 | 0.98 | 0.57 | CEthreader | | GEGGLVMYWVTFGLMAFSALAFAVMTFTRPLNKRSHGYITLAIVTIAAIAYYAMAASGGKALVSNPDGNLRYYARYIDWFFTTPLLLLDIILLTGIPIGVTLWIVLADVAMIMLGLFGALSTNSYRWGYYGVSCAFFFVVLWGLFFP--GAKGARARGGQVPGLYFGLAGYLALLWFGYPIVWGLAEGSDYISVTAEAASYAGLDIAAKVVFGWAVMLSH-- |
5 | 7jh5A | 0.09 | 0.07 | 0.84 | 0.85 | EigenThreader | | --------------------------------SGSELARKLLEASTKLQRLNIAEALLEAIARLQELNLIRRAEKEIDDAAKESEKILEEAREAISGLKAIAETQDLNLRAAKAFLEAAAEIIDEAERAIRAAKRESERIIEEARR---LIEKGSELARELLRAHAQLQRLNLELLRELLRALAQLQELNLDLLRLASELTDPDEARKAIARVKRESNAYYA |
6 | 4czbA | 0.10 | 0.08 | 0.82 | 0.23 | HHpred | | ---LMMAIGYLGLAL-VLGSLVAKIAEKLKIPDFIPSDEIFEYAGPIGLIFILLGGAFTMRISLLKRV-----IKTVVRLDTITFLITLLFNMVLNNESIFNDPLGIVSTSVILGLFGLFSNPIDLAGGAIVLLLAEKIIIHC-DFHEYVAPLGGAMLLLYVGDDYGFSGYMAVAIMGLYLGDALFRADDI------------------------------- |
7 | 4bwzA | 0.15 | 0.12 | 0.84 | 0.52 | MRFsearch | | --LNQPVVIGEVLAGVLVGPALLG---------LVHEGEILEFLAELGAVFLLFMVGLETR-----LKDILAVGKEAFLVAVLGVALPFLGGYLYGLFETLPALFLGTALVAITARVLQELRPYSRIILGALIVLACVNGVAETGQVEVGAITR------------LIVLSVVFVGLAVFLSTLIARLPLERLP-------VGSPLGFALALGVGMAALAA- |
8 | 2d57A | 0.11 | 0.09 | 0.82 | 0.77 | FFAS-3D | | -FWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVLLVELIITFQLVFTIFASCDSKRTVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENH-----WIYWVIIGAVLAGALYE----------------------------------- |
9 | 4cadC | 0.08 | 0.07 | 0.91 | 0.94 | SPARKS-K | | ---NPKLYFLSTFVVTYILWFTGAYLSFSSTY---------SGIYMLIMLPGLMAPFIISTILIAKKKDFINRLFTIPVVFLLMPAVILLSILLSIPFLLAATFEELGWRGYAFDSLQSRYSLFKASILFGIFWSLWHFPLIFVNNSYQYEIFNQSI-------WYGLNFFLSILPMGIIITWMCLKNRKFLINLNQELLAITQDTKIIETGVLFLVAAAII |
10 | 3rkoC | 0.11 | 0.10 | 0.93 | 1.19 | CNFpred | | FHLNLMWILGGVIGVFLAIDMFLFFFFWEMML-KTRITAATKFFIYTQASGLVMLIAILALVFVHWTFNYEELL-GVEYLLMLGFFIAFAVKMPVVP--LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG-TDIKRLIAYTSVSHMGFVLIAIYTG----------SQLAYQGAVIQMIAHGLSAAGLFIL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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