Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MGSSDDVKSPKSEKTSPPATEHNGVHMYPDWAGIQAYYGPRVALPPYFNSAIAPRHPPPPYMWGPPQPMVPPYGAPYGAIYAPGGVYAHPAIP |
1 | 1buvM | 0.08 | 0.05 | 0.65 | 0.58 | DisCoVER | | -----------------------IQGLKWQH-----NEI----TFCIQNIAFRPLRFREVPYAIMIFFHAYFPGGGDTHFAVHELGHALGLE- |
2 | 6vbu2 | 0.07 | 0.06 | 0.99 | 0.52 | CEthreader | | DFDIRVFKEDEIVAEMSETEIITSLCPMYGSRFGYALSNGTVGVYDKTARYWRIKSKNQAMSIHA-FDLNSDGVCELITGWSNGKVDARSDRT |
3 | 2i14A1 | 0.06 | 0.06 | 1.00 | 0.58 | EigenThreader | | MKRFYIANKTTDKILEVKNIRKTSLPNNWRWGVLVGVEEVAKLLEGIPYETALLGMLSQASGIATAAGIAPMIDRAAFIGGCDGVSGVLGAEM |
4 | 1l2aA | 0.16 | 0.09 | 0.53 | 0.30 | HHpred | | MPNGDKIQPGIKF---IDIR--TKYRQDPYYDIVYQAYLRGEA-PVL-N--------YHR-FWHE---------------------------- |
5 | 6y5q8 | 0.28 | 0.14 | 0.51 | 0.88 | MRFsearch | | --------------------GPNAHKVPPPWLIAMQRYGPPPSYPNLKI-------------PGLNSPIPPLYGDVFGTN------------- |
6 | 2xd8A | 0.12 | 0.11 | 0.91 | 0.33 | FFAS-3D | | MANANQVALGRSNLSTGTGGATDKYALYLK-------LFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNAD- |
7 | 3boiA | 0.14 | 0.12 | 0.86 | 1.47 | SPARKS-K | | CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGGNPGCAGGVGGAGGASGG--------TGVGGRGGKGGSG-----TPKGADGAPGAP |
8 | 3ir6A | 0.17 | 0.08 | 0.45 | 0.46 | CNFpred | | ------------------------------YASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPES--------------------- |
9 | 2e26A | 0.01 | 0.01 | 0.94 | 0.83 | DEthreader | | ---PVGEHSIIVPYYGTSGGLIDQILIGGNIS-NTVLEDDFTLDSRKWLLHPGTLVV-TTDIAVNYSVDSWHPLVRPLPTRSQ-ATRFRWHAI |
10 | 2nbiA2 | 0.12 | 0.12 | 0.97 | 0.85 | MUSTER | | ---QPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPPSVNRPDCDKLSTAIPTQCRPDNPMFSPSPDGSPPVCSPTMMPSPLPSP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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