>PF07775 (515 residues) LEAVTPALPALHELRDALTEFADAFKVVTREAVKRKFGIDWGYDVRNEMFFKKLEEVVTM AEDYVYKNIAVEKGPLDTSGQWPKAIIRFKLNGEEVAHITVYWTGTELYAKFGGSRENAE RLASIIRALGGEAEVKRVSKVWKVKLYTDGIASIRHNGWLNAVRSFVDELKDKGLISENR YKQVVKEIETGPNTVKFADVEFSVNYKTRDKYSDIIQVRYTPTSEASKNAALNALKARGL KEGIHFTVKEHGGYEIRVTKEAYAKAVETLAQSGLKKGEHYAVYDKRREIRVKKDHKDAI VNALKAAGLAEGKHFAVKWSGQYIIYITYDGLREIQRMALGGNVEAERFIRELEDVLKRR HGDDAAKKLIEVLTPAREEGAAELPLAVYDEGGNLIARVVDLRYEFVENGQPVSHCAGRD CRLRIIAEYEVGGERKQFKIEWYWKKQQKKKGNTTTTYYFEMATLTVKDDVEAAVLKALT GKAKRGRVFLLADQLDALCRFKALKDAVDQWRRGK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LEAVTPALPALHELRDALTEFADAFKVVTREAVKRKFGIDWGYDVRNEMFFKKLEEVVTMAEDYVYKNIAVEKGPLDTSGQWPKAIIRFKLNGEEVAHITVYWTGTELYAKFGGSRENAERLASIIRALGGEAEVKRVSKVWKVKLYTDGIASIRHNGWLNAVRSFVDELKDKGLISENRYKQVVKEIETGPNTVKFADVEFSVNYKTRDKYSDIIQVRYTPTSEASKNAALNALKARGLKEGIHFTVKEHGGYEIRVTKEAYAKAVETLAQSGLKKGEHYAVYDKRREIRVKKDHKDAIVNALKAAGLAEGKHFAVKWSGQYIIYITYDGLREIQRMALGGNVEAERFIRELEDVLKRRHGDDAAKKLIEVLTPAREEGAAELPLAVYDEGGNLIARVVDLRYEFVENGQPVSHCAGRDCRLRIIAEYEVGGERKQFKIEWYWKKQQKKKGNTTTTYYFEMATLTVKDDVEAAVLKALTGKAKRGRVFLLADQLDALCRFKALKDAVDQWRRGK | |||||||||||||||||||
1 | 1lfwA2 | 0.07 | 0.02 | 0.35 | 0.74 | DisCoVER | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGIFTLE-------------FSFKNDDTKGDYV--LDKFK----AGIATNVT-------PQVTRATISGPDLEAVKLAYESFLADLDGSFEINDESADIVLIGQGKNSATFLA-LF-L-----D---QYAFAGRDKNFLHFLA--------------------------------------------------EV--------------EHEDFYGKKLGIFHHDMGDLASSPSMFDYEHA--GKASLLNNVRYPQG------TDPMIKQVLDK-FSGILDV------------TYNGFEE----------------------- | |||||||||||||
2 | 1llwA | 0.09 | 0.06 | 0.68 | 0.67 | DEthreader | ---VEEVVRLEKLTVLGWREVHIEQILVTCAGDELDRRLYI-----------ARSIIGKKLAE--DFYVCYKLGLKYTS-N-FAVYHRRSMPKWPLAQPMRL-------LGH-N-GEINTL--NI-WMAAR---------------SGWT-ELEALTPIVNQANSDSYNLGPALLLR---RFAQV-NPPID--------------PLRENLVMSLAMFLGKRGN-------------------------KLRSPVLIKQLQVAEVVLTDRPGAILSFIPPLAVVLLASLIVDTAQCWSICPYLALE----KRQVEL--------LLASYHGAQIFE-AIGLGAELVEYAFAGTTS------------GE-PPPHHILLISVKLVIIAAGVAKANADII----ISGHDGG-LSSIKHA-SPWELGV---------------TE--------------VHRVLMENQ-LRDRVLLRAGAEEYLIIGRTDLLKVR--L-----------NHEPVHSNG | |||||||||||||
3 | 4j8fA | 0.09 | 0.08 | 0.92 | 0.97 | CEthreader | IGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTVSILTIDDGIFEVKATAGDTHEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLD--------KAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGLESDLEIDNEGVIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAARDLALACKLDYDEDASAMLREVQPRAQKIAEHRRKYERKREE----------------------------------- | |||||||||||||
4 | 4m5dA | 0.05 | 0.04 | 0.82 | 0.78 | EigenThreader | PATPLYNFSVLSSATVLGRLWLQQRHSGSLTILMAALLNGGGINSNKILLYQLFKGVIKYLATMDLCHDGQFHSNPA------SKYIDEGFQTPT------LFDKDLCYDVQLPLGAHKITNVARYALGDRIIQIEMVGQFVRVKLIVNPSECD------------------------------------KLVTGPAHSESLRRF----KDGSITHCCVWSTSPIISSIVNFALQKHVSKK-----------AQISNLNLKSFDDLYKIIFQMKLPLSVKSILPVGFQDVILEFELLKIQEELSANSPYNLEIVTLNILTYGFKFRVLTFKRWLDTHELAELIAIKPFVDFLKVLKFISQWNWQYKGIQMNFTNLRNSDPNGTHLQFFVASKNDPSGILYSVVDLRTPIGLKSSCGILSAPLILSSRKYGGEKGDKNVITGLIKKFRVNLDCNVKPVVILN-----KEAIFHEIAAFGNDMVIN---FETD------------------------ | |||||||||||||
5 | 5ehkA2 | 0.14 | 0.06 | 0.41 | 0.34 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------TGAGGPLYLRLRVPR---RNQDDFLDQVPVLVRAGIE-HGADR----------------------WFFIRYSDTA--GQHLRVRFRGEREKEIGARLVEWQRQGLLAGHELGQYDPERYLAEFTETAFQAAISLLRLTRRAGFRY----TLD-EVT-----AISAAALADAFGPPAPVVEPVVGGL---QWAPDLFDPAAAWMSSTGPPDYRRDPARWQKLIDPTDGCQVLAAVRRFGTAYRRPTDSPSTQ--------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 4lgvA1 | 0.15 | 0.04 | 0.30 | 0.50 | MRFsearch | ----------------------------------------------------------------------------------------------------------DLLVIFGGDLARKMTFRALYRLERREEL------EHPIIGVASD--DITLDQLLDRAREAIKATGE--TFDDAVFDRLAGRLS-------------------------YLSGDVT--DTGLYSELAEKIGGDS-------------RPLYYLEMSLFAPIVENLAKADLLE---------RARVAVEKPFGH-------------------------------------------DLESARDLNARLRAVLDEDQ---------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6b03A | 0.10 | 0.09 | 0.90 | 0.74 | FFAS-3D | -SDLDDERKIILEWRQRVQAIEESINDTPASVLQDFYG-----DITPADAEREIQRYFA-----ALPNVAVPTRDYYEPLLKPQLKVARSQSGSSQVSFVYRFNDKD---AFGQSEYRHRLLTQITMSASLVVRKSDIGKTTAALGFFANVMPGGHDAAISAVLKEIERFKRYP-LNEQDITEITSDIREVADTIKGEDVNRHWQ--RWLASPDTLAQFSVPGKPDAISKLQKQWALATLAPLRLEQWQLSNGDRVVWNPWQAQLASQLVNQSGPATWS-----------------GESLSNWKKEKTL--SLSIDQEADQLTLSGTAASLFGLYRELNVADPDVMKESMMSLARQKANDDQAELAPALLSQWHKERYLATIPRQPASEVKQHLALSGKREATSAINVEP---------RADILTWSFTPHARDDALGIYRMRVDSELEDKKQRIETEVSFTSAPERAQELWTLAEQAFSELPTK----ITQQDVDEQK--AQFIRAEKGRQGD- | |||||||||||||
8 | 6sceA | 0.15 | 0.13 | 0.87 | 0.58 | SPARKS-K | CLLGNDPAPAYLGLKVVEREAGRVAK-----------AVFYSFPAWNEEYGKKRQAFFRLLSEKVLYEERLEKGLEEAEAREVWVNLTWRRPGARVFLVELFLWPREEERSLEAEALTLEEYARLLEPLGEAAQAARLREGGVFVVHRGLPYWGEAKDSRKALSAFSGEAKRLGPYERENVFARWRAWAREYGVFLVDGPLLLALVSEQAHAGPREVYLLTTPEESRLRWAEAFFRGKGVR---VHRSFLSGPWALREVRDLLAPVVEEALRRGH---PVHANLNSGTTAAL------GLYLALR-----DGARAHYLDGDRLLLAEVPEGPEDLLALREYPDALAEEILRRFLKFWKKRFGQAVYSHLNAHLAPKG--GQARGGHLVPLTEVDGVFFHRGALWFVE--CKPTDEGLRERAPIA-ELVRSVGGVEARGLVARRWRGAPPPASPNLV-YALEGGERFPEE-----LEKALSRNPRRGLE--------------------------- | |||||||||||||
9 | 1i1qA | 0.11 | 0.09 | 0.80 | 0.83 | CNFpred | ----------------------------------------------------NPTALFHQVCGDRPATLLLESADIDSK-DDLKSLLLVD------SALRITALGDTVTIQAL--SDNGASLLPLLDTALAGVENDVLPAGRVLRFPPV-NARLCSLSVFDAFRLLQGVVNIPTQEREAMF-DLVAGFEA-CPDYCFYLAETLMVIDHQ-KKSTRIQASLFTASDREKQRLNARLAYLSQQ-PLPVTPVPDMRCECNQSDDAFGAVVRQLQKAIR-AGEIFQVV-PSRRFSLPCPSPLAAYYVLKKSN---PYMFFMQDNDFTLFGASPESSLKYDQIEI-DRDLDSRIELDMRTDHELSEHLMLVDLARNDLARICT--------------PGSRYVADLTKVDRYS----------YVMHLVSRVVGELRHDLDALH-LSGAPKVRAM-YGGAVGYFTAH-----GDLDTCIVIRSALVENGIATVQAGAEADETRNKARAVLRAIATAHH-- | |||||||||||||
10 | 3iayA | 0.05 | 0.03 | 0.66 | 0.67 | DEthreader | S--S--FERKKLPT-FDPYDISFQQFCVLMVDCGINYRNL-IAHPAEGDWSH--TAPLRIMVSIAPFIRNVFTLNSHATE--MLSNWRNFIIKVDP----TTNFDIPYLLKDFPYGLKTVKQEIKES--YETKNVN------ID---QLDLLQFIQ--TL--SE--I-LQDSETRRRL-VYC-KDAYLPRLMLALLARGQQASDDQY--------EGA-----------------LDFNSLYPSI-M--------MAHN--------------------------LCYTTLCNKATVERL-NLKIDEDYVITPDYFVTLPCLAISSVT--GR--I----------VVYGDTDSVM-AVLFKPINLEFEKAYKYAGLFLDQKGLASV----------RRDSCSLV-I------------HNRVDIKIISKTLAVGDRVDYVIIG----------------NRAEDPLF-V---------------QVDSRYYLTNLQNPIISIVA----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |