Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MGLTGTTLDLVMSLAFFGSAAAHNCQNGTRPASEQNREGCDYYCWNADTKSWDKFFFENGEKCFYNTGENGTCQNGECHLTTNSGGPNESDDNTPAPTEKPKQKKKKPKKTKKPKRKSKKD |
1 | 3gatA | 0.03 | 0.01 | 0.24 | 0.80 | DisCoVER | | ------------------------------------CSNCTTLWRRSPMGDPVCNACNRPLTMRK-------------------------------------------------------- |
2 | 6eooA | 0.03 | 0.02 | 0.84 | 0.83 | DEthreader | | -------CP-NI--R--MD--PKLCPADWIISERRLTYVSAGVALQEEFDRYSGYYMSDKELFEYIAR--AGWTGKYAWVLLIEEIE-FIFALLGRHGQVHSIRGHYHLYLLGSRIAAL-- |
3 | 3ghnA4 | 0.15 | 0.12 | 0.75 | 0.84 | CEthreader | | --EKTQLEFMSQQCARTDGQPLSFYHWGAAVPHSQGDALCRHMCRAIGESFIMKRSFLDGTRCMPSGGTLSLCVLGSCRTFGCDGRMDSQQVW---------------------------- |
4 | 4n0hA | 0.05 | 0.05 | 0.99 | 0.63 | EigenThreader | | -SLKESIERLSSFQSKYNILENFFDATVVKLLKQAGVGSSSGAAASVACDLVALGTDTSVRLPACYGSVLGFKPDTVGILSKKINVLRKVFHTLDKYDMKDPTSLSEFSHESMPIGFHRLY |
5 | 6st4A | 0.19 | 0.10 | 0.52 | 0.32 | HHpred | | -------------------YAPLTCYFTNSTLGLLAPPNCSVLCNST--TTWFNETSPNNASCLLVDLQVGHCDNGTCAGPPRH------------------------------------- |
6 | 6st4A | 0.19 | 0.10 | 0.51 | 0.53 | MRFsearch | | -----------------TAYAPLTCYFTNSTLGLLAPPNCSVLCNST--TTWFNETSPNNASCLLTNCSVGHCDNGTCAGP---------------------------------------- |
7 | 5l75F | 0.08 | 0.07 | 0.98 | 0.40 | FFAS-3D | | --MILAVFTGAVAAVNVAEAKANPGMAALAQGQQASDGNAVMFIESVNGNRFHDVFLAQSDSGELSQQQYVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVSADTLWKTHTDRAAE- |
8 | 2mxwA | 0.10 | 0.07 | 0.76 | 0.81 | SPARKS-K | | --------GHMQESYSQYPVPDVSTYQYDETSGYYYDPQTGLY-YDPNSQYYYNA--QSQQYLYWDGERR--------TYVPALEQSADGHKETGAPSKEGKEKKEKHKTK---------- |
9 | 1wl4A | 0.09 | 0.03 | 0.36 | 0.46 | CNFpred | | LGASGCRILVTLLHTLERMG---------------RSRGVAALCIGG--GMGIAMCVQRE------------------------------------------------------------- |
10 | 5teeA | 0.04 | 0.03 | 0.91 | 0.83 | DEthreader | | SPGTPPFR---VI-GEL-VGFTATSSTVALHQH---T-ISTL-HWSPRVKDLIVSGDGPRTILTCSEDLVAIGYKDGIVVIIVI-HRLRGHDTGSLTIVSMRPSLFASLAFISWMNLTVSV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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