>PF07759 (315 residues) VRDRQGWATDIAAAFTAQDIPPTPENLCAVIAVTEQESTFQADPQVPGLGKIAWKEIDRR ADQMHIPNFLVHTALLIKSPNGKSYSERLDKVRSEKELSAIFDDFINMVPMGQKLFGNLN PVRTGGPMQVSIAFAEAHAKGYPYKVDGTIRREVFSRRGGVYFGTMHLLGYPANYPQPIY RFADFNAGWYASRNAAFQRAVSRLTGIKLALDGDLINYGTDKPGSTELAVRSLGKRLDMS DSAIRRALEKGDSIDFEKTSLYKQVYALAEKSGGKKLPREILPGITLESPKITRQLTTAW FAKRVDGRWQKCMAK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VRDRQGWATDIAAAFTAQDIPPTPENLCAVIAVTEQESTFQADPQVPGLGKIAWKEIDRRADQMHIPNFLVHTALLIKSPNGKSYSERLDKVRSEKELSAIFDDFINMVPMGQKLFGNLNPVRTGGPMQVSIAFAEAHAKGYPYKVDGTIRREVFSRRGGVYFGTMHLLGYPANYPQPIYRFADFNAGWYASRNAAFQRAVSRLTGIKLALDGDLINYGTDKPGSTELAVRSLGKRLDMSDSAIRRALEKGDSIDFEKTSLYKQVYALAEKSGGKKLPREILPGITLESPKITRQLTTAWFAKRVDGRWQKCMAK | |||||||||||||||||||
1 | 4owdA2 | 0.14 | 0.07 | 0.49 | 0.84 | DisCoVER | --RLPRYESHFKQSGKQLDT-----DWRLLAAIGYQESLWQPGATSKTG------------------------------------------------V-------------------------RGLMM-LTNRTAQAM----------GVS-NRLDPKQSIQGGSKYFVQIRSEL-RSWFALAAYNIGGAHL--EDARKMAEKEGLNPVKMLPRL---------------------------------------------AQKQWYAKT--------R-YGYARGGE----------TVHFVQNVRRYYDILT-- | |||||||||||||
2 | 4pkcA | 0.06 | 0.04 | 0.71 | 0.67 | DEthreader | DAEETIPADELHE--------------------L--QKPST-RTKLEDEF-IVGYHAEDP-NMFPLYPEL-------TVGLLISWARRQGIIC--LKDAMQAKFFTFLICHAERYASGYA--EVEVEMERLKISEHGAREPGSN--------------AAKRIRTAEP--SIVFRYSKNLRWVFEC------------------------SIKH-DE------IGTEQMKEYAKFSLNGNG-ATDEEAH-NWVNGIHGRRKTQKTRSEGGISKDSRWH-AVGGLLNQRLSVPIMRS---K--HGFEIWNSYITWF | |||||||||||||
3 | 4ok7A | 0.07 | 0.04 | 0.62 | 0.49 | CEthreader | EQLAARWFPHITTAMNEFGITKPDDQAMFIAQVGHESGGFTRLQENFNYS---VNGLSGFIRAGRITPDQANALGR----------KTYEKSLPLERQRAIANLVYSKRMGNNGPGDGWNY-RGRGLIQITGLNNYRDCGNGLKVDLVAQPELLAQDEYAARSAAWFFSSKGCMKYTGDLVRVTQIINGGQNGIDDRRTRYAAARKVLA---------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 4ri8A2 | 0.06 | 0.05 | 0.88 | 0.55 | EigenThreader | ------------------EFPSYT---------------INRKTHIFQDATHMLSDISSAMANGNWEEAKELAQCAKRDWNRLPSLRCHEDLPLFLRCGWIYTRILSRFVEILQRLHMQRIYCPDSRGRWWDRLALNLHQHLKRPTIKCITEGLADPEVRTGHRLSLYQPSCKKFKHLVEELALAHYRRSGFDGSTFSTLYGLLLWDIIFMDGIPDVFRNACQAFLEARLQLIHDAPEESLRAWVAATWVSWDRFAQDLVSCLGLSGVCRHLAADFRHCRGGLPDEVKG--PNDRLSHKQMIWLAELQKL----G | |||||||||||||
5 | 2y8pA | 0.13 | 0.07 | 0.52 | 0.68 | HHpred | -QRAMQWMPISQKAGAAWGVDPQ-----LITAIIAIESGGNPNAV--------------------------------------------------------------------------SKSNAIGLMQLKASTSGRDVYRRGWSG-EPTTSELKNPERNISMGAAYLNIPLAGIEVLQYLVVSYANGAG---------ALLRT-------------FSS----DRKKAISKIN---DLDADEFLEHVARN--HPAPQAPRYIKLEQALDAMLEHH--------------------------------------- | |||||||||||||
6 | 6gmhQ | 0.10 | 0.08 | 0.82 | 0.42 | MRFsearch | --DDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPELGEAKKYFLASLDRAKAEAEHDEHYYNAISVT---TSYNLARLYEAMCEFHEAEKLYKNILREHP---------------NYVDCYLRLGAMARDKGNFYEASDWFKEALQIDAWSLIGNLHLAKQ--EWGPGQKKFERILKQPSTQSDTYSMLALGNVWLQTL---------REKEKRHQDRALAIYKQVLRYAANGIGAVLAHK-----GYFREARDVFAQVREATA--------------------DISDVWLNLSAVQMYENCLRK | |||||||||||||
7 | 5o9zG | 0.10 | 0.09 | 0.94 | 0.70 | FFAS-3D | -INDIKKARLLLK--SVRETNPHHPPAWIASARLEEVTG---------KLQVARNLIMKGTEMCPKAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVEL---EEPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAERAGSVATCQAVMRAVIGIGIECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPK----AEVLWLMPAARSILALAFQ- | |||||||||||||
8 | 5ue0A | 0.13 | 0.10 | 0.76 | 0.51 | SPARKS-K | NEMAAIAMQGFRSMIEQFNVPATAKELQAMEAQLTAMSDQLVGADGELPIQAIKDALAQALKQATAMGQVAFAAAVGGGSA-GTAGTVQMNVQLYKTAAAALSDGYSAYTL-NSLYSESR-----SGVQSAISQTANPALSRSVSRSADASQRAAETRDSQTL------------------------GDVYSRLQVLDSLMSTIVSNPQANQEEIMQLTSKAPQSLQKFAAQLEREFVDG----ERSLAESQENAFRKQQVLVNIASLFSGYL------------------------------------------ | |||||||||||||
9 | 5xgcA | 0.12 | 0.10 | 0.83 | 0.81 | CNFpred | ------IAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDEDDITELKTGSDL--------MVLLL--LGDESMQKLFEGGKSVFQRVLSWIPSNNH-----QLQLAGALAIANFA------NDANCIHMVD--NGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL--KFLKSE--MPPVQFKLLGTLRMLIDAQAEAAEQLGKN--------VKLVERLVEWCEAKDHAGVMGESN-------------RLLSALIRHSKSVIKTIVQS | |||||||||||||
10 | 3ikmD | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | --L-DLIPLE-GASFDRAHIRYLQSYLPVNQNWERYLAEAQGYEELREMKKSLMDLANDAC-----DPWLWDLEWDLQEFKWYRKLCPRLDD---PGPSLLSLQMRV-RGGPCNVGSPFANKMISFWRNA----------------------HKRISSQMV--ILPQVVTRRA------TASNAKA-ADVDSQELWIAAVDMHGCGWMLHSKINYGRGAGQAYAATKSDEGEWLV-RELNLPTGTSRVNWVVQSSAVDYL-RCMFAYLGLNDLPQSVAFFSA----------------LRKEVTMDCE-GIP--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |