Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | GLSLKGNTYWYAIDYETEDCFLHYFDFTRERFENRLPLPQPPSSYSYAQVNISLSSVKEEKLAVLFSPRGRFVIDIWVTNKTEPDAVSWSYFFKVETTQHLSGFLFENFLIDEEKKVIVIFDIYGGANNAYTISGETGHFRKVDLRQSPYKRPYRL |
1 | 3vngA | 0.08 | 0.06 | 0.82 | 1.18 | CNFpred | | VAVLNRLLYAVGGFDGNRLNSAECYYPERNEWRMITAMNTIR--------SGAGVCVLHNCIYAAGGYDGDQLNSVERYDV---ETETWTFVAPMKHRR------SALGITVHQGRIYVLGGYDGTFLDSVECYDPTDTWSEVTR----------- |
2 | 3r4yA | 0.06 | 0.06 | 0.96 | 1.17 | DEthreader | | PSAVLKHVWYTKGEGE-KTEVWHATSKDKTWKEIGPAIQRGAAGAYDD-RAVFTPEVLRYYLVYQTVKAPSLEHIAIAYSSPF---GPWTKSAPLSPENDSFDHKVHDPCLMFFRFYLYYKGE--GGRIKHGVAIATKSENITNLETCGAEAHKYN |
3 | 5gqtA2 | 0.10 | 0.08 | 0.80 | 0.59 | DisCoVER | | IKVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVTFGVR------PSERSVFASAAIGKHIVIFGGEIAGQLTDGTFALDTETLQWERLDKTPSSR--GW---------------TASTTATIDGKKGLVMHGGK-FDDLFFYGIDSA------- |
4 | 1uv4A | 0.06 | 0.05 | 0.85 | 0.83 | DEthreader | | W-MIKWYALGTGLT---EERGRVLKSDAKNWTVQKSIFTTPLSWWSVPNYGQWAPDIQYYWLYYSVSSGSNTSAIGLASSTSISSGGWKDGLVIRYNSFWALEAPTLMVSSTWKGPGGQDIV-----NGNILVRHLLINDLN-------------- |
5 | 6gy5A | 0.06 | 0.06 | 0.90 | 0.46 | CEthreader | | VAVLGGFLYAVGGQDGVSCLNVERYDPKENKWTRVASMST--------RRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRR-------KHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGL |
6 | 6jnfA | 0.05 | 0.04 | 0.94 | 0.67 | EigenThreader | | DYQA-SDFSVNKTLNPGEVAVASFLQSVPQLALGTLYSDGSAPGDA-GVSYLTRYV----SIFSGQLQANG-ALIASLWRKVAQNVEAGIETTLTIG---AKYEYRSVYRGDSNGKVACFLERLPTLSVLFCGEIKNDTKIGCGLQFNQELLMLQQ |
7 | 5afbA | 0.12 | 0.11 | 0.92 | 0.27 | HHpred | | FVVYDGALFFNKE---RTRNI-VKFDLRTRIKSE-AIIANANYHDTSGKSDIDL-AVDENGLWVIYATEQNGKIVISQLNPYTRIEGTWDTA--YDKRSASAFMICGILYVVKSNKIDYIYNTDQSKDSLVDVPFPNQYIAAVDYNPRDNLL---- |
8 | 3nolA | 0.08 | 0.06 | 0.83 | 0.30 | MRFsearch | | GFFYRNGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGK--------RYFGEGISDWKDKIVGLTWK--NGLGFVWNIR-----NLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTALPELNELEWV---------- |
9 | 1uypA1 | 0.11 | 0.10 | 0.90 | 0.67 | FFAS-3D | | -VEKDGKLVYTYYRDPTHETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNGEWRMVLGSGKDEKIGRVLLYTSDDLFH--WKYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTN--SVLFSMGKEGKLNVEKRG---------- |
10 | 4yw0A3 | 0.10 | 0.10 | 0.92 | 0.74 | SPARKS-K | | FVELSGVIQAYMRTNNGKIAYLTSKDAGT-TWSAPEYL-KFVSNPSYGTQLSIINYSQLIAVILSTPNSTNKHGQIWIGLINDDNTIDWRYHHDVDYSNYGYSY--STLTELPNHEIGLMFEKSRNE----LHMKNVVPYITFKIEDLKKNL---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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