Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MLWNKASRPAGHARLSDVRPFTPPGTTWPTFLSQPDASAKDTSEYWRSHQRRPGHYLAPSRCFGTKRAVQPVTQDSAMSVHSPRQVQPGLHICPNPTRQRETRLNSGEATNVGQVITWHPADALEQSGPSSRSRKTQRCPSIHPARYNLAYIFVPTRRVSERHV |
1 | 6tgbA1 | 0.06 | 0.05 | 0.97 | 0.61 | DisCoVER | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGIYITLLQGDDDGETVKVAVIMQRIHLRFMFKNFAMSYVKLM---KEDGTTLHDGFHDLVVLKGDKMEDASAYLTLPSYRHHVENGG-LSVSSRDVFSISTLVCSTGGGG- |
2 | 5a12A1 | 0.09 | 0.05 | 0.61 | 0.46 | CEthreader | | -------------------------------------------------MADRAKLLTTPGVFGNFSTYKVRADYMKLPAAERKAAAAEAQMVKVIVDTYLTRGLGAGSDYLLRVHSTDMAATQAFLV---DWRATKLGMYSDVTENLVGIT------------ |
3 | 4txgA1 | 0.04 | 0.04 | 1.00 | 0.57 | EigenThreader | | EYPTSMNNAGNPLDWTFSNARLGSLNKGYVALLQTLRDRLDRAAAQDGRYYETFVMSYDLHGAWNRFVGPNAALYDDGIGYLNTDWAYHYYRGGLPASRVNMGVPYYTRGWKNVSGGGLWGSSGDGAVGIDNIPGGSNPALAAPWLWNAFLSTEDMFWELAGDY |
4 | 2iqtA | 0.13 | 0.10 | 0.77 | 0.34 | HHpred | | FLWEKRHIVPFL--KVDKGLQDEAGVQL-KPFPELGKLCEEAVG---------------YHVFGTKRSVIKQANEQGIRDIVEPILEPEVDIHCP-EKAKAEEILKRELKITDEHPLRVVALSGGYSREQANELLSRN--------HGVIASFS---------- |
5 | 2pffB | 0.10 | 0.01 | 0.12 | 0.93 | MRFsearch | | -----------------------------------------------------------------------------------------------------------RVIVAGTLDLYKTSKAAQDV------------------------------------- |
6 | 1j5aK | 0.11 | 0.10 | 0.97 | 0.33 | FFAS-3D | | -VIGQNGGRTIELPLPEVNSGVLHEVVTWASRRRGTASTRTRAQVSKTGRKRHGDRSVPTFV-GGGVAFGPKPRSYDYTLPRQVRAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAGVNVYDIRLVIDAAALEIVEE--- |
7 | 2bfuL1 | 0.09 | 0.09 | 0.95 | 0.83 | SPARKS-K | | DDTSSVRGSLLDTKFAQTRVLLSGGDVLLDEYLYNGQDFRATVAFLRTH-VITGKIKVTATTSGCCLMLAINSGVRGKYSTDVYTICSQDSMTWNPGCKKNFSF----TFNPNPCGDSWSAEMISRSRVRMTCVSGWTLSPTTDVIAKLDWSIVNEKCEPT--- |
8 | 3mdnA | 0.17 | 0.04 | 0.22 | 0.37 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------LARAIARLEGLSRA---------TTPHMRLSAAFSDGQTLYAARY |
9 | 2vcaA | 0.04 | 0.03 | 0.76 | 0.67 | DEthreader | | -GMDIAYKKRNDYYAAESIIIAYKFLYDDIQLANSAQEYYEVMCNAYGNGEKFGKFELILQERLSPLIGIERTKDLEFNARALVTWGS-RGLYYRWMEDWVKKSDTKLYPTEAS--------------------------------------LAIAYSNMDKIL |
10 | 6etxG | 0.10 | 0.10 | 0.99 | 0.69 | MUSTER | | QLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYC-NDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|