>PF07598 (625 residues) TAFFLISIGSGFEYGVNHTHIHALSKIEYSVIQKPTDPPKDKPIKVIVSDGGKFCYGPNF SGGESYIIIEQCWQMHVMNARYDVFQRISYNINNTWLCITAPEKVIKAEKNWDYVHLRPC TINDPLQRWTIKDNSFWTADGFYRLKNYNWYGYISRNSGDRYNHTLDPSMNDWVNTVATP GNISIQTSIAWNLQTTEGQERYFIRWGGSDKNTTPLYYNPESGHIAQYDPISGSLYCMYS QVGGNQWNWVTWALCSDAAISKDNPAFWNVFFKTEEGGIITDYKGNLLRVTRYGSNWGVA YAAKPDFVKTDTKNSPTSLFVLDKSLLDWTRYTYSNLGKTDQYCPAGKHGSIIHRRIKRT LPPDFQLTEEWIQRLYAIARSTTRQTQHSGICGVCLLQTFQMLAELQEYHSQGPLSAGGY FFDTAPNADPFISFRQRYPLLDNTLSDAINIFGPSYNTTWLLTLAYAITMLPQYEWTLSN TFNTRPEILSYISSLINSPPGSIWLAILRWRRPDGTFIGHSVPILRTSQGLVVIPTNVSS SRTLENFRQSLIPSTDPNHIITNLERPNVTLTRFTTIELGGLYQNTFDFLISNNNCTGEG EDRRGTGNYPSSTSVNQCSGDGRCA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TAFFLISIGSGFEYGVNHTHIHALSKIEYSVIQKPTDPPKDKPIKVIVSDGGKFCYGPNFSGGESYIIIEQCWQMHVMNARYDVFQRISYNINNTWLCITAPEKVIKAEKNWDYVHLRPCTINDPLQRWTIKDNSFWTADGFYRLKNYNWYGYISRNSGDRYNHTLDPSMNDWVNTVATPGNISIQTSIAWNLQTTEGQERYFIRWGGSDKNTTPLYYNPESGHIAQYDPISGSLYCMYSQVGGNQWNWVTWALCSDAAISKDNPAFWNVFFKTEEGGIITDYKGNLLRVTRYGSNWGVAYAAKPDFVKTDTKNSPTSLFVLDKSLLDWTRYTYSNLGKTDQYCPAGKHGSIIHRRIKRTLPPDFQLTEEWIQRLYAIARSTTRQTQHSGICGVCLLQTFQMLAELQEYHSQGPLSAGGYFFDTAPNADPFISFRQRYPLLDNTLSDAINIFGPSYNTTWLLTLAYAITMLPQYEWTLSNTFNTRPEILSYISSLINSPPGSIWLAILRWRRPDGTFIGHSVPILRTSQGLVVIPTNVSSSRTLENFRQSLIPSTDPNHIITNLERPNVTLTRFTTIELGGLYQNTFDFLISNNNCTGEGEDRRGTGNYPSSTSVNQCSGDGRCA | |||||||||||||||||||
1 | 1rzoB | 0.12 | 0.04 | 0.37 | 0.58 | DisCoVER | ----------------------------------DP--E-PIVRIVGRN---GLCVDVTEFFDGNPIQLWPCKSDWNQLWTLRKDSTIRS-N---GKCLTIS--KQ-------QVVIYNCATVGATRWQIWDNRTIINPRSGLVLAATGTKLTVQTNIYVSQGWLPTNNT------------QPFVTTIVGLY-----GMCLQANSGVWLEDCQQWALYA-DGSIRPQQ---NRDNCLTTDAN-IKGTVVKILSC-GP-A---SSGQRWMFK---NDGTILNYNGLVLDVRRSDPSLKQIIVHPF-HG------NLNQIWLPL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 4z8sB | 0.10 | 0.04 | 0.42 | 0.62 | CEthreader | ---------------------------------NEQCSPQQRTTRISGRDGLCVDVYGALTADGSRVILYPCGQQQNQQWTFYPDNTIRSL----GKCLATS-----ALSSGSNVVITNCDYLRYDDGWMVSSSGTMMNKSSHLVLTANAATSRTNLTGENNVFAAKQAWRIGNYVEPIVTTIIGLRHMCLEATDNDTNVWLESCVKNKTKQYWALYSD------DTIRVNNNRNLCVSSSTDSSSKLIVIRRCDG---------SINQRWVFTPQGTISNPGYEAVMDVAQNDVYLKKIVLSS------ATDKGNGQQWTVFY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 3ttoA | 0.07 | 0.06 | 0.79 | 0.73 | EigenThreader | IQAKVTIGQETYYFSKDH----GDAQLLPEGHYRDQNNTILKGTLQFFDPGEQLKGGVAK-YDDKLFYFESGKGNLVSTVAGDYQDGHYISQDGQTRYAD------KQNQLVKGLVTVN-------GALQYFDNATGNQIKNQQVI-VDGKTYYFDDKGNGEYLFTNTLD------MSTNAFSTKNVA----FNHDSSSFDH----TVDGFLTADTWYRPK---SILAN-GTTWRDSTDQDDANFDSIRIDAVDFIHQVQQSEAKANQHISLVENDALIESNNKPGTLITDHTQNSTEATPNYSI-----IHAHDKGV-----QEKVGAAITD--------ATGADWTNFTLFYKDQRATNKKYNSYNIPSIYALMLTNKDTVPQYMANKSIYYDALVSLMTARKSYVSGGQTMKSVRFGKDAMTANDLGTSAT-------------------------------------RTEGLIGNDPKLQL------------NDSGAAHYRAVILTTR-DGLATFAWTN----DQGTLTFSNQEINGQ----------DNTQ--------IRGQVSGYLAVWVPVGASDITSFEMAPQYRSSGDHTFDNGYAFTDRY--DLGFNTPTKYG | |||||||||||||
4 | 4tlvA | 0.17 | 0.08 | 0.46 | 0.77 | HHpred | -----------------TSASLSFCPDWSPPNQSLVKELEDTPVYLRGIKTQKT-FMLQADPQNNVFLVEVNSSFPQTIFFWDVYQRICKDLTGISLSLTAFTTQYAGQL--K-VHLSVSAVNAVNQKWKMTPQ---DAITQFRVSSTENGLFWNTKSGCTTHAQFV-TM-----RAASTFFVDVQ--LGWYWRG----Y-YYTPQLSGWSPDGQIFYDLKTSKIF-FVQDNQNVFFLHNKLNGYSWDWVEWLKHDMNE-DKDENFKWYFSRDDLNFRHIRCYDNQQLKVIISGSRWGGWYS-TYDKVESNV----EDKILVKDGFDRF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 4tlvA | 0.16 | 0.06 | 0.39 | 0.55 | MRFsearch | ------------------------------------------PVYLRGIKQKTFMLQADPQ-NNNVFLVEVNSSFPQTIFFWDVYQRICLKDAQISLSLTAFT-------GQLKVHLSVSAVNAVNQKWKMTPNGLFWNQHDLYVCPEELQIIVDECT----------THAQFVT-----STFFVDVQLGWYWR-----GYYYTPQYQMKTPDGQIFYDLKTSKIFFVQD-NQNVFFLHNKLTGYSWDWVEWLKHD---MNEDKDENFKWYFSRDNFRHIRCYANQQLKVIISGSRWGGWYSTYD---------NVEDKILVKDGFDRF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1xi5A | 0.16 | 0.13 | 0.82 | 0.59 | FFAS-3D | --IRFQEHLQLQNLGINPANIGFSTLTMES----------DKFICIREKVG-----------EQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLIEMKS-----KMKAHTMTDDVTFWLVTDNAVWSMEGNYRTDKQKWLLLTGYSVDRKVSQPIEGHAASFAQ-FKMEGNAEESTLFCFAVRGQAGGKLHIIENQPFPKKAVDVFFPPEAQNAMQISEKHDVVFLIT------KYGYIHLYDLETGTCIYMNRISGETIFVTATAGIIVNRKGQVLSVCVEEEN-------IIPYITNVLQNPDLALRMAVRNAEELFARKFNALFAQGNYSEA--------AKVAANAPKGILRTPDTIRRFQSVPAQPGQTSP--------LLQYFGILLD-------------------QGQLNKYESLELCRPVLQQLLEKWLKEDKLECSEELGPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLR----------------------NVMRISPDQGQQFQMLVQDEEPLADITQIVDVFMEYNL---------IQQCTAFLLDALKNNRPSEGPLQTRLLFTHYDRAHIAQLCEKAG--- | |||||||||||||
7 | 4tlvA | 0.17 | 0.08 | 0.50 | 0.87 | SPARKS-K | TSASLSFACPDWSPCIAEKIDNYLQSLPQ--YASSVKELEDTPVYLRGIKTQKTFMLQADPQNNNVFLVEVNSSFPQTIFFWDVYQRICLK-DQISLSLTAFT--TQYAGQL-KVHLSVSAVNAVNQKWKMTITQFRVSTENGLFWNTKHDLYVCPLKNPPSDLEELCTTHAQFVTMRAASTFFVDVQLGWYWRGY----YYTPQLSGSYQMKTPIFYDLKTSKIFFVQDNQ-NVFFLHNKLNKYSWDWVEWLK-HDMNEDKDENFKWYFSIPSVEGLHIRCADNQQLKVIISGSRWGGWYSTY----DKVESNV-EDKILVKDGFDRF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 4tlwA | 0.16 | 0.07 | 0.42 | 0.92 | CNFpred | ---------------------------------------EDTPVYLRGIK-TQKTFMLQADPNNNVFLVEVNPK-PQTIFFWDVYQRICLKD-QISLSLTAFTTQ-----GQLKVHLSVSAVNAVNQKWKMTPTQFRVSS-ENGLFWN-HDLYVCPLKNPLEELQIIVTTHAQFVTMRAASTFFVDVQLGWYWR----GYYYTPQLSGWS-PDGQIFYDLKTSKIFFVQD-NQNVFFLHNKLTGYSWDWVEWLKHDM-NEDKDENFKWYFSRDD-NFRHIRCYANQQLKVIISGSRWGGWYSTYDK--------NVEDKILVKDGFDRF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4lglA | 0.06 | 0.03 | 0.58 | 0.67 | DEthreader | DSDRHLG-------P-VIQRNILENPGWYTAYTLFQVANAAAMAS-----ANAFFVAQ----QTIEVIKTRANPLGIEVFGALLQYPATDGA-----DGSTQRFGAAGLKIAIHFDT-R--VGEQSAPLKEGRGINLRPGEVGISL----DETVTVQDLLDLWVPKIHPAPAGQTE--Q-SLQPNQYALQRNICLIPE-GNPASAVMCMVPLMVT---------VYMDGANMNAQVCRPAD------FGADVCHLNL--------------------------------------PIGVKSH-----------------LQAFLPRTSLDQSIG---------APYGSASILVISWMYLATEVAILSANYMAKLEYPILDLRPL-KKQA-AIEVEDVAKRLMFGFHAPPT-SESLGELDRFCDA---MIAIYQEA---QAITHGEIDP----------ADNPLKNAPHQEAAWPAVGRINN-------------------------GD------------------------R----------------------HLVCSE--G---------ME-------------------------------------------------- | |||||||||||||
10 | 2ebsB | 0.11 | 0.11 | 0.93 | 0.61 | MUSTER | WAAFYVSEDRGYESPFPMGANDMGRNNGERLAVNPFNS---NEVWMGTRTEGIWKSSD---RAKTWTNVTS-IPDAFTNGIG--YTSVIFRNGTIYASATAPQGMHDGGVSWEPVAGQPSSWLFPDKKVALTPNFLYVTDYPGPWGVTFGEVWRQNRTSGAW-DDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDIYLSTDAGDVTQLSSPSGNWGHPTNAARYKDGTPVPWLDFNNGPQWGGYGAPHLTKFGWWMSAVLIDFNPEHLMY---GTGATIWATDTLSRVEK--DWAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGNISKHDDLTKPQKMFGAPQFSN-----LDSIDAAGNFPNVVVRA-GS--------------SGHEYDSACARGAY-ATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIV--WSTKLDEQASGPWYSHDYGKTAGDLKAQTANVLSDKDGTFYATDKFFVSTDGTGTSLMPAVNPWVAGDVWVPVPVGTANATLVSVGAPKSSAPSAVFIWGTDKPDIGLYRSDWTRVNDHNYSGPTMIEADPKVYGRGTNGRGTKSTAKCAN----QKGTHCY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |