Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AHHGGLGGIYGADEWCMRKVPADLKGSPYYSYKALLADGINRRASVTGNAGDGQINWVLQASTVYSQATTGTPTIGTTNSKKLFTFPLTNKIRPDSITDFGSITWTGLNPNWTTAPYNCNNWTDGADINVGTIGNYNA |
1 | 1dy1A | 0.15 | 0.12 | 0.78 | 0.83 | DEthreader | | TLSGGMRGIRGADFQCFQQARA-VG-L-SGTFRAFLSSR-LQD-------------LYSRRGSPIVNLKDEVLSPSWDS-----------IFSFDGRVAW-KSVWHGSDSGRRLMESYCETWRTETTTGQASRLIL-- |
2 | 1dy1A | 0.16 | 0.14 | 0.87 | 1.00 | DEthreader | | PLSGGMGI-RGADFQCFQQARA-V--GLSGTFRAFLSS-RLQDL----------YSIVRRGSVPIVNL--KDEVLSWDSFSGQGQLQGARIFRVHPAWPQK-SVWHGSDPSGRRLMEYCETWRTETTGATGQASSLLG |
3 | 1dy1A | 0.20 | 0.17 | 0.89 | 1.93 | HHpred | | PLSGGMRGIRGADFQCFQQARAGL----SGTFRAFLSSRLQDLYSIV-----RRADR---GSVPIVNLK-DE-VL-SPSWDSLFSGSQQARIFSDGRRPPQKSVWHGSDPSGRRLESYCETWRTETTGATGQASSLLS |
4 | 1dy1A | 0.18 | 0.16 | 0.89 | 1.61 | DisCoVER | | ALSGGMRGIRGADFQCFQQAR--AVGLSG-TFRAFLSSRLQD-L-YS---------IVRDRGSVPIVNLKDEVLSPSWDSLFSGSQGQLQARIFSFDGDVLKSVWHGSDPSGRRLMSYCETWRTETTGATGQASSLG- |
5 | 1dy1A | 0.18 | 0.16 | 0.86 | 2.25 | MRFsearch | | --SGGMRGIRGADFQCFQQARAV---GLSGTFRAFLSSRLQDLYSIV--------RRADRGSVPIVNL---KDEVLSPSWDSLFSGSQGARIFSRHPAWPQKSVWHGSDPSGRRLESYCETWRTETTGATGQASS--- |
6 | 1dy1A | 0.17 | 0.15 | 0.88 | 1.55 | SPARKS-K | | PLSGGMRGIRGADFQCFQQARAV---GLSGTFRAFLSSRLQDYSIVRRADRG---------SVPIVNLKDEV---LSPSWDSLFSGSQGRDVLRHPAWP-QKSVWHGSDPSGRRLMSYCETWRTETTGATGQASSLLS |
7 | 1dy1A | 0.16 | 0.14 | 0.89 | 0.71 | MAPalign | | -LSGGMRGIRGADFQCFQQARAVGL---SGTFRAFLSSRLQDLY--------SIVRRADRGSVPIVNL--KDEVLSPSWDSLFGQLQPGARIFSFDGRDVLKSVWHGSDPSGRRLESYCETWRTETTGATGQASSLL- |
8 | 1dy1A | 0.17 | 0.15 | 0.92 | 1.10 | CEthreader | | PLSGGMRGIRGADFQCFQQARAVGLS---GTFRAFLSSRLQDLYSIV--------RRADRGSVPIVNLKDEVLSPSWDSLFSGSQGQLQPGARLRHPAWPQKSVWHGSDPSGRRLESYCETWRTETTGATGQASSLLS |
9 | 1dy1A | 0.20 | 0.19 | 0.96 | 1.40 | MUSTER | | PLSGGMRGIRGADFQCFQQARAV---GLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSGSQGQLQPGARIFSFDGRDVLRHPA--WPQKSVWHGSDPSGRRLMSYCETWRTETTGATGQASSLLS |
10 | 1dy1A | 0.18 | 0.17 | 0.95 | 1.10 | FFAS-3D | | PLSGGMRGIRGADFQCFQQARAVGLSGT---FRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSSGSQ----GQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMSYCETWRTETTGATGQASSLLS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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