>PF07586 (308 residues) RMAFIFFPNGAIMPAWRPHGSGEKFELAETLQPLAELKNDILVISGLAQDNGRPKGDGAG DHARSASVYLTSAHPVKTAGADIRVGISVDQVAAQHLKGQTRLPSLELGIERGRTAGSCD SGYSCAYSSSISWKSPNTPMAKEIDPRAVFERLFGDAERSAAERKRRALIRKSVLDFVAE DARRLRNRLGQADRRKLDEYFTSIREVEARIEQAEQAARIERPDIEIPEGIPRDRAEHIR LMYDLMALAFQTDTTRVITFMLGNAGSNRPYPMVGVNSGHHELSHHRGDENKIAQLKKID RFLAEQFA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RMAFIFFPNGAIMPAWRPHGSGEKFELAETLQPLAELKNDILVISGLAQDNGRPKGDGAGDHARSASVYLTSAHPVKTAGADIRVGISVDQVAAQHLKGQTRLPSLELGIERGRTAGSCDSGYSCAYSSSISWKSPNTPMAKEIDPRAVFERLFGDAERSAAERKRRALIRKSVLDFVAEDARRLRNRLGQADRRKLDEYFTSIREVEARIEQAEQAARIERPDIEIPEGIPRDRAEHIRLMYDLMALAFQTDTTRVITFMLGNAGSNRPYPMVGVNSGHHELSHHRGDENKIAQLKKIDRFLAEQFA | |||||||||||||||||||
1 | 6hr5A1 | 0.09 | 0.05 | 0.61 | 1.16 | DisCoVER | NIIFILTDDQRF-DAIGYAG-NKFVNTPEMDKLAQQG--TY--FDHAIV-TT-------PICAASRASLWTGLHEHNFTGNVREMNNAYPKLLKN-N---GYY-TGFYGKY----------GVR-YFDEFESNNRYKDKRGYYY--------------------------------------------------------------------------------KTINNDTVHLTR----YTGQQAIDFIDATQPFMLSLSFSAPHISGIDLEIKKIVMGD-NGYFKWLMYDNSIRV--P--LIV-F- | |||||||||||||
2 | 4fyeA2 | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | NIE--------HLAYRQVFKDPMQVVVVGTLIHRFKAEQFIMYIPCGRY-QLM-SDLV--L-GNSS-MARGP-RMPAIKALINEEVIQTLAQRQIDRMNPLSVTECYTQVVTAGQRAENQKEQFEYVRQMMFDGKAKYQARMSSWGNAFVNQMTDIDALRKAYYTEHKGQ-IN--L--L---I--V---TDPETKSRLQHFYNSCAYLTQAQELYY-E----------NTWHHG-KNNFKLQTLMASLSC-E-LD-YANTKGSKSN-DRGQRLH---------HT-NT-G--VSGGKFE--NFAD--- | |||||||||||||
3 | 2yyjA | 0.08 | 0.08 | 1.00 | 0.66 | CEthreader | RSPDYLNAVVMAYAASADYFGEFAENVRNYYRYLRDQDLATTHQPDPYIPVGVVKQTEKGIVVRGARMTATFIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFLGVAALMAEGIGADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPD-RGALDGARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPFLEKFLQGAALEAKERVALFRLAWDMTLS | |||||||||||||
4 | 1zefA | 0.10 | 0.07 | 0.78 | 0.77 | EigenThreader | KNLIIFDGMGARILKGQKKDKLGPEIPLAMDR-------FPALSKTYNVDKHVPDGATATAYLCGVKGNFQTIGLSAAARTRGNEVISVMNRAKKA-----GKSVGVVTTTRV-----------QHASPAGT--YAHTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDGK---------------NLVQEWLAKTELMQASL-------------DPSVTIHRDSTLDPSLMEMTEAALRLLSR----NPRGFFLFVEGGRIDHGHHESRAYRALTETI-----------MFDDAIERAGQLTS | |||||||||||||
5 | 4wjiA | 0.13 | 0.08 | 0.64 | 0.33 | HHpred | --IVVTTRSGLGD-RYTLSEEGADLASGAVAAEIAAHKPGAIVTDSTKGSVIHLDVHFVPGHPIAGT-EHSGPDAGRGRWCILTGTEAVARLFWETLGS-VDE-----D-PKHHDKVLAIVSHLP---HIIAYDLET------VTESEVITRLAASDPTWRDVCLHNKDAILE-LARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAGQDT------------------------------------------------------------------------------------------ | |||||||||||||
6 | 3tkaA | 0.08 | 0.05 | 0.63 | 0.38 | MRFsearch | RLLAIDRD-------------------PQAIAVAKTIDPRFSIIHG--------------------------------------PFSALGEYVAERD-LIGKIDGILLDLGSSPQLDDAERGFSFMRDGPLDMR---MDPTRGQSAAEWLQTA------EEADIAWVLKTYERFAKRIARAIVERNREQPMTRTKELAEVVAAATPATRTFQAVRI-----------------WVNSELEEIEQALKSSLNVPGGRLSIISFH-----------------------------SLEDRIVKRFMREN-- | |||||||||||||
7 | 5mw8A2 | 0.10 | 0.07 | 0.77 | 0.55 | FFAS-3D | -LCVEIKPKG-----FIPFSNDVTHEMKHKVCRYCMHQ---------HLKVATGKWKKISKY--CPLDLYSGNK------------QRMHFALRSLL--QETQNNLRIFKN-------------------------GELIYGCDLAHHLKPFFFPSGPHCTKAVIRELVHKGCLLYKTLQ-----VQMLDQLDIEGLYPLYKRVEQYLEEFPEERKTLQIDGPYLDLSTEDDGTVAFALTKVQQYRVAMTAKDCSIMIALSPCPVIPSSRVSVLDLDL---------KPYESIPHQYKLDSKIVNYYS | |||||||||||||
8 | 5cqcA | 0.13 | 0.11 | 0.86 | 0.65 | SPARKS-K | -------------SIYPPET---SWEVNKGMNS-SRLHKLYSLFSAFYLGDDSVLLTGAYGFQSKQQIFLYVAGYHVDAKSDA-GWVNLDRRLSEISESKATQPTFILPFVEMPTDITKGVQH--QVLLTISYDPKSKQLPTVYDCDEILTQSIEKSTDFTLGKFTRAAYNGNTFRTIKEVISSSAQGLTSQHVQDIESCIKYVVDIESALTEGK--------------TLPVQLSEFIVALEDYGKLRSQAKLTAVLIGILNDIKGKNEISE----------SQYDKLVKEVDCLMKLVQFHLKNLG | |||||||||||||
9 | 2puhA | 0.09 | 0.07 | 0.81 | 0.55 | CNFpred | ETVIMLHGGGPGAGGWSNY--------YRNVGPFVDAGYRVILKDSPGFNKSDAVVMD-EQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYRIGKLILMGPGG-----------------LGPSM---FAPMPMEGIKLLFKLYAEP-------------SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPL-----------TWDVTARLGE-IKAKTFITWGRDDRFVPLDHGLKLLWNIARLHVFSKCGHWAQWE----HADEFNRLVIDFLRHA-- | |||||||||||||
10 | 4fyeA2 | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | NI---------LAYGERQVFKDPQVVVVTGIHRFKEQF-IMYIPCGRY----LMGSDLV---GNSSMAGPGARMPYDFDDKLIAVIQEEVIQTLAQQNPLS-VTECYTQVVTAGQVAAE---NQKEQFEYVRMMDAFDQARMSSWGNAFVNQMTDHNQIDALRKAYYTEHKQINKALELK-QI--VI-ETDPETKSRLQHFYNSCAYLTQAQ-EL---------YYENTWHHGK--NNFKLQTLMASLSCELD--YANTKGSKSNDRKFEIQKDNGLFGKVANFAKIK-------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |