Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | HKEEWHEINGVKNLYGEQLGLITDHLNKNLSGLTLRQTSTVPYNRARYTDLKNNFVQTYKTSHCELVQHIHNAFLSSEPGVQARVYNFLLDQVADVINLPETTAHIDLVVDCFYDDTYELKPEGILYLLYIMDII |
1 | 5e57A | 0.05 | 0.04 | 0.84 | 0.83 | DisCoVER | | LTVPLELAHGLLSGP--AAPLHALVIYDASQLCAGNLGALYFAPFRRRRAELRSAYRSLAAAVIAECPPEADDLP-FRLVESVINSRSPEQPWVIGE---------------GALR-V-LGFDGDFAEL-AAAT- |
2 | 1n1zA | 0.09 | 0.08 | 0.88 | 1.00 | DEthreader | | SNYIQSL--IQATHQQ------E--LKD-L--SRWWSRLCFPEKLPFVRDRLVESFFWAVGMF-AAIIVLATVIDDIYMLCYWGVHNY-ISDAAYDILFF-CLQYLRKSVVDLVEAYFSVASPAIISPTYFTFGM |
3 | 6fesA2 | 0.07 | 0.07 | 1.00 | 0.49 | CEthreader | | WNKIYRLVHTMKEITETMGFSPVALVLEAIMMLVKLMLNSEIKITSDLIDAVKKMLDMVTRLLIEAVNVLIKMVEKNDMEFWNLIYRLVHVMKEVTETFSSVAKVLHTIMNLVDKITSDLIDKVKKKLDMVTREL |
4 | 4za6A | 0.07 | 0.07 | 1.00 | 0.57 | EigenThreader | | PTDLERRRAIDTAASMYLAPLDMSLLAERLGDELLGTVLAEATERTYRKAMSQAGPEYILDVFGRVMRSVESLTKREPMVFIKLAMMISASITAEILQLSPQVLGEALVRICDVHLYKAEIETALDLIALLLGVT |
5 | 1lshA3 | 0.09 | 0.07 | 0.80 | 0.30 | HHpred | | --------------KMSSLFVKNSEIHTVLKHLVE--NNQ-LSVHEDAPAKFLRLTAFLRNVDAGVLQSIWHKLHQ-----QKDYRRWILDAVPAM----ATSEALLFLKRTLASEQLTSAEATQIVASTLSNQ- |
6 | 5nr4A | 0.11 | 0.10 | 0.96 | 0.42 | MRFsearch | | --GRLQVGQELLLYLGADLEEDLGRLGKTVDALTGWVYRVSLMGLEILSAFVDRLSTRFKSYVAMVIVALIDRMGDAKDKVRDEAQTLILKLMDQVA---PPMYIWEQLASGFKHKNFRSREGVCLCLIETLNI- |
7 | 4ffbC2 | 0.13 | 0.11 | 0.84 | 0.65 | FFAS-3D | | --------------------LKNAHNITLISTWTLVEKGLTSSRATTKTQSMSCILSLCGLDTTQSVELVIPFFEKKLPKLIAAAANCVYELMAAF-GLTNVNVQLKHVPQLAGHGDRNVRSQTMNLIVEIYKVL |
8 | 5cwdA | 0.11 | 0.11 | 0.99 | 0.68 | SPARKS-K | | DEEVAKQAAKDCLEVAKQAGMPTKEAARSFCEAAARAASNDEEVAKIAAKACLEVAKQAKEAARSFCEAAARAAAESNDEEVAKIAAKACLEVAKQAGMP-TKEAARSFCEAAKDEEVKIAKKACKEVAKQAGMP |
9 | 4y5jA | 0.12 | 0.11 | 0.96 | 0.63 | CNFpred | | FQVLKFKLDIIRSVA-ENYPLTTTTVDLVINEIIEKL--ADAKNGAAAADVLSAFAEAT--KLEYVVGKVLSFAFEQSPKVQSEAFNWVNRSIIEFGFQLQPKTLIEDVRKGVQSTNPTVRASAIQMVGTMSMYM |
10 | 1pmiA3 | 0.07 | 0.06 | 0.83 | 1.00 | DEthreader | | --KPLDQLAKTLATVPENEIIGQELVDEFISGI--KLP-AESQDDVNNRKLLQKVFGKLMNTDDVIKQQTAKLLERTDR--EPQVFKDIDS---------R---LPELIQRLN-KQ--PNDIGLFCGCLLLNP-V |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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