Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | DILAAVRKHLDKVYPGENGGSTEGPLPANQNLGKVISDMEQTGTAEETIVSPGNGS |
1 | 6y5rA1 | 0.10 | 0.09 | 0.88 | 1.00 | DEthreader | | TTFAAAMYILGAIEIV--YIV-PAM-LMRVYGTAFLVLMVLVVVCGAG--SLDL-V |
2 | 6m01B | 0.08 | 0.05 | 0.66 | 0.62 | DisCoVER | | -IVRRYVPFLRLGG-----------GSELRDL-GLTVELLAALEFATPDA------ |
3 | 4y0kA | 0.09 | 0.09 | 0.96 | 0.83 | DEthreader | | INAIGGS--DLSCYTGGLGIIDPCLSRTFGEIGLAHQLIHDNQHPSNMAVLVNATE |
4 | 2vsqA4 | 0.05 | 0.05 | 1.00 | 0.61 | CEthreader | | QLQEYPGVKDAVVVADRHESGDASINAYLVNAEDVKAHLKKQLVPQTFTFLDELPL |
5 | 2o16B | 0.05 | 0.05 | 0.98 | 0.57 | EigenThreader | | LMIKVEDMMHTLLRTHFETPLFEVMTSVAPQAKESAIYMQ-KHKIGCLPVVAKDVL |
6 | 5k4pA | 0.16 | 0.16 | 0.98 | 0.23 | HHpred | | -LDDFVAAHGFKRYDEKFAKFTPNLLATDDFIAQSIQWLQTHSNAYDVSMLYDHGE |
7 | 2pffB | 0.20 | 0.09 | 0.45 | 0.68 | MRFsearch | | -AAQDVWNRADNHFK--------------DTYGFSILDIV---------------- |
8 | 2hg7A | 0.13 | 0.11 | 0.82 | 0.29 | FFAS-3D | | ILYDAIMYKYPNAVSRKDFENLRAPLPTQAELETWWEELQKNPPYE---------- |
9 | 1seiA1 | 0.11 | 0.11 | 0.95 | 0.77 | SPARKS-K | | DPIADMLTAIRNANMV---RHEKLEVPASKIKREIAEILKREGFIRDYEYIEDNKQ |
10 | 1p68A | 0.20 | 0.14 | 0.71 | 0.46 | CNFpred | | DLLEDLQEVLKNLHKNW-HGGKDNLHDVDNHLQNVIEDIHD--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|