Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LPVGRKPLVCVLAVPNHMTYADFCQFCGSFIQHILEMRIVRNDGDEDQYSVLIRFDGQESADNFYKHFNGKRFSSMEVEVCHVLFTVDVQFTASIEHA |
1 | 2d9pA | 0.11 | 0.10 | 0.92 | 1.17 | DEthreader | | -RY-QVVNLYVKNLDDGIDDERLRKAFSPFG-TITSAKVMMEG--RSKGFGFVCFSSPEEATKAVTEMNGRIV---ATKPLYVALAQRKEERQSGPSS |
2 | 2m9kA | 0.16 | 0.14 | 0.91 | 1.17 | DEthreader | | -MEEEVRTLFVSGLPVDIKPRELYLLFRPF-KGYEGSLIKLT--A-RQPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAK---- |
3 | 4c7qA | 0.11 | 0.09 | 0.87 | 1.10 | SPARKS-K | | GMAEVEYRCFVGGLAWATTDQTLGEAFSQFGE-ILDSKIINDRETRSRGFGFVTFKDEKAMRDAIEGMNGQDLDG-----------RNITVNEAQSR- |
4 | 4p6qA | 0.12 | 0.11 | 0.93 | 1.17 | DEthreader | | IHPKATRTLFIGNLEKTTTYHDLRNIFQRF-GEIVDIDIKKVNG-V-PQYAFLQYCDIASVCKAIKKMDGEYL---GNNRLKLGFGKSMPTNREQLA- |
5 | 2rvjA | 0.15 | 0.13 | 0.89 | 1.17 | DEthreader | | --TNVRDCIRLRGLPYAATIEDILDFLGEFATDIRGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMK---DRYVEVFQCSEMNLM------ |
6 | 5bjrA | 0.12 | 0.10 | 0.86 | 1.17 | DEthreader | | ----QVRTLFVSGLPMDAKPRELYLLFRGA-RGYEGALLKMTSKKPTSPVGFVTFLSQQDAQDARKMLQGVRFDPEAAQVLRLELAKSN--------- |
7 | 2dnhA | 0.15 | 0.13 | 0.89 | 0.60 | HHpred | | SRGGRDRKLFVGMLNKQQSEEDVLRLFQPF-GVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADT---------- |
8 | 5bjrA | 0.11 | 0.09 | 0.82 | 0.52 | DisCoVER | | ----QVRTLFVSGLPMDAKPRELYLLFRGA-RGYEGALLKMTNGKPTSPVGFVTFLSQQDAQDARKMLQG-VR--FDAQVLRLELAK-S--------- |
9 | 2dhsA | 0.17 | 0.14 | 0.85 | 0.30 | MRFsearch | | ---VEDRKLFIGMISKKCTENDIRVMFSSF-GQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD----------- |
10 | 5t9pB | 0.18 | 0.16 | 0.91 | 1.08 | SPARKS-K | | --EEYSGIIYVSRLPHGFHEKELSKYFAQFGD-LKEVRLARNKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMG------HLLQVRVLPKGAKIEKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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