Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | IILVVAFFQIFIVQAVPENLTSIVIGLIIVAIGLALFIRGLELGIFPVGENLATDFAKKGSLFWLLLFAFTIGFATTVAEPALIAIADKASFISDGKIDSFFLRMTVAFSVGFAIALGTFRILVGHPIQYYIITGYILVVTLTFFSPIEIIGLAYDSGGVTTSTVTVPLVAALGIGLASSIKGRNPAIDGFGLIAFASLMPMIFVQGYGIF |
1 | 3rkoB | 0.15 | 0.14 | 0.92 | 1.06 | CNFpred | | EGVGLCSYLLIGFYAAMKAFVVTRVGDVFLAFALFILYNELTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQPLQTWLADAMAGPT---PVSALIHAATMVTAGVYLIARTHGLFLLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTM-----SQIGYMFLALGVQAWDA--------AIFHLMTHAFFKALLFLASGSVI |
2 | 6exsA2 | 0.10 | 0.06 | 0.63 | 0.62 | DisCoVER | | KAFIP---------------------------------------LFILGMLFWSIQE------------------QGSN-VLNIYGLRSDMQLN-TRFGEALFQLAIKFSIGTLL-AGL-SY--ILIGLVGLGY-----------GHTQF--SVNWVILSYVICVLSGWLLTNASAQAINIKLGQTNYFIFLGTVAIVITLIILSKIT--- |
3 | 4a01A | 0.07 | 0.06 | 0.81 | 0.83 | DEthreader | | IPVCAVIGIAFLF------------------LLGGVTS-LV--SG--FLGMKIATYANRTTFRSGAVMGFLLAANGLLLACAALVVASSSFGLN-ELTAMLYPLIVSSVGILVCLLTTLFATEIIEPLKKQLVISTVLMTIVA--FTVKSWQLFLCVVAALML--IA-GLIDAYGPISDNATDLDANTTAAIGKGFAGS------------ |
4 | 5tsaA | 0.13 | 0.11 | 0.87 | 0.39 | CEthreader | | ---------------------------NRVHVGYAVLGGAAGFAATALGALMALGLRAISARTQDAMLGFAAGMMLAASAFSILPGLDAAGTIVGPGPAAAAVVALGLGLGVLLMLGLDYFTVNRVWLFVLTIILHNLPEGMAIGVSFATGDLRIGLP-LTSAIAIQDVPEGLAVALALRAVGLPIGRAVLVAVASGLMEPLGALVGVGIS |
5 | 4z3nA | 0.09 | 0.08 | 0.94 | 0.93 | EigenThreader | | LGYVYAQPLLRSLGIIGYATEFYYYSLLFLSVGMAQMLMQLIIAVGIVIYNFFIVRLDAFTLTGRIDYFIITPMLAIA---TALLTVVGQNWGHGNVTRTLNAYWAAVALAFSIVLPWMYPLFTVSDYAVLQTRIMAFVAISLLASKPWYSVLLTLMRHVFI--------SVPVVYLLAI--VLEMRITGVYFGAMSGTFVAALLAWRLLR |
6 | 4cl4A1 | 0.11 | 0.08 | 0.66 | 0.26 | HHpred | | --GGLLLTTAVYDRVRLRPLQRIGLGLFFGSMAMAVAALVE---------LKRLRTAHAHGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPGMKGMST-GLLLSTLALGFFFSSVLVTIVEKHPWYNFYWLVAVLVALNFIFLVFSKWYVY----------------------------------------------------------- |
7 | 6t1zA | 0.16 | 0.16 | 0.98 | 0.23 | MRFsearch | | --TVFSSMTIYYNQYLGSAITGILLALSAVATFVAGILAGFVMVFGTIIQLLGAALAIAVNPWSTFIAFLLISFGYNFVITAGNAMIIDASNAENRKVVFMLDYWAQNLSVILGAALGAWLFRPFEALLVILLLTVLVSFFLTTFVDKTYMIFMGAN--IATTFIIMQFDNFLPVHLSNSFKTITYGQRMLTIYILACVLVVLLMTTLNRL |
8 | 6t1zA | 0.12 | 0.11 | 0.89 | 0.85 | FFAS-3D | | -----------------KNLQLRLGIVFLGAFSYGTVFTGILLALSAVATFVAGILAGHVNPWSTFIAFLLISFGYNFVITAGNAMI--IDASNAENRKVVFMLDYWAQNLSVILGAALGAWLFRPAFEALLVILLLTVLVSFFLTDKTYMIFMGAN--IATTFIIMQFDNFLPVHLSNSFKTITYGQRMLTIYILACVLVVLLMTTLN-- |
9 | 5k7vA | 0.10 | 0.10 | 0.98 | 0.97 | SPARKS-K | | ARAADNKTTEKAVAEAIEEIARLATAAIQLIEALAEFMARAISAIAELAKKAIEAIYRLADDTFMARAIAAIANLAVTAILAIAALAS-----NHTTEEFMARAISAIAELAKKAIEAIYRLADNHTTDKFMAAAIEAIALLATLAILAIALLAFMAKAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIARKAIKAIEMLAKN |
10 | 7a23M | 0.15 | 0.14 | 0.94 | 0.99 | CNFpred | | MIAVFCMLDLLLFYVFPESVLIPMFIIIGVLLGSLFMLLAILLILFQTGTTDLQILLTT-RRQIFLWIAFFASFAVKVPMPVHIWLPEAHVEAP---TAGSVILAGILLKFGTYGFLRFSIPMFPECFTPFIYTLSAIAIIYTSLTTIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGS---------ILLMLSHGLVSSALFLCVGVLY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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