Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | GRIVLREKAKLSVNSLSQTGGSLYMEAGSTLDFVTPQPPQQPPAANQLITLSNLHLSLSSLLANNAVTNPPTNPPAQDSHPAIIGSTTAGSVTISGPIFFEDLDDTAYDRYDWLGSNQKIDVLKLQLGTQPSANAPSDLTLGNEMPKYGYQGSWKLAWDPNTANNGPYTLKATWT |
1 | 3zppA2 | 0.08 | 0.06 | 0.80 | 0.72 | DisCoVER | | GNVYFPEGTYLVKEIVFLKSTHLELNEKATILNGI-----NIKNHPSIVFMTPTEDISYSG-------GTIDMNGALNGTKAKNLLINSSGAFAIGNSNNVT----IKN---V------TFKDSYQG-HAIQI--A-GSKNVLV---DNSRF-LGQALPKTMIKESIQKSDKS-- |
2 | 1vsy4 | 0.10 | 0.08 | 0.79 | 0.83 | DEthreader | | -------N-----YDLILYDTLADIISLKFTIRFIVMD-----KLYRVHTNVSMSKLDMNDTN----LTLINVSAA----PIQDLFTLLAFSVFQLKYVEKI--FQLVDVD-LEDSLTKIQTTLQSM--DDKINYFALLNNFNDSFKEDPNYELIPACRLFPPDRWGG------- |
3 | 3zppA2 | 0.10 | 0.09 | 0.90 | 0.72 | CEthreader | | GTYLVKEIVFLKSHTHLELNEKATILNGIMTGLFTDDGAQVEWGPTEDISYSGGTIDMNGALNEEGTKAKNLPLIN---SSGAFAIGNSNNVTIKNVTFKD---------------SYQGHAIQIAGSKNVLVDNSRFLGQALPKTMKDGQIISKESIQIEPLTRKGFPYALNDD |
4 | 1dabA2 | 0.10 | 0.07 | 0.68 | 0.72 | EigenThreader | | ATWVMTDNS--NVGALRLASGSVDFQRFKVLTVN-------------TLAGSGFRMNV--FADLG--------------LSDKLVV---MQDASGHRLWVRNSGSEPA-------SANTLLLVQTPLGSA--------ATNKDG----KVDIGYRYRLAAN---GNGQWSLVGAK |
5 | 6n2bA | 0.17 | 0.13 | 0.76 | 0.37 | HHpred | | GRTTIKSGATLYCDQLEVRNNGVFIEAGATLVTRAISISGGTIEGPGT-------RQVNPSAT--FPSYPPFITLPADPGATTLKSATPWEIVVYGESGI-NDSELITEVNKLGSFPSNVR-LYLASKGNITFSNPTSLPLYNP------------------------------- |
6 | 2odlA | 0.19 | 0.13 | 0.67 | 0.48 | MRFsearch | | GSVNLIGGKVKNEGVISVNGGSISLLAGQKITISDIINPTITYSIGGNINVRAATIRNQGKLSA--------------SGNIVLSAK-EGEAEIGGVISAQNQ-------------LITGDKVTLKTGAVIDLS-------------GKEGGETYLGGD---------------- |
7 | 5m30B1 | 0.12 | 0.09 | 0.69 | 0.43 | FFAS-3D | | GVVAAEDDSLLPLSRLNATRLIVRFPDGTLIDTERADNLPPVCSDRSLVDIV-LALP-------LLNANGGNLDNGSESERPRRWKSERAVLRHNLTLRMAHQENAAWL---------TCPVTRLVRDAQGQWCRDPR------------------------------------- |
8 | 6n2bA | 0.13 | 0.13 | 0.98 | 0.71 | SPARKS-K | | GRTTIKSGATLYCDQLEVRNNGVFIEAGATLVTRAISISGGTIEGPGTRQVNPYPPFIDDIKNFDFDSRMSVTTLPADPVGAYDKSATPWEIVVYGESGINDSELITEVNSKLGSFPSNVRLYLASKG-NITFSNPTSLPLYNPTTGK-LVIEGAIITLGSTNISGAG-IELIYK |
9 | 3ljyA | 0.14 | 0.10 | 0.68 | 1.12 | CNFpred | | AAAKVSGNANFMVNPLTGDETVIKANANSLVQLKE------------TVTVGKLDLNVSGS--------ANMVVN-------HLEAD-KIECDIDGSGSITIK-------------KGNAKEGDYSIVSSGDIHA-----------FGLAVPQLSCKVTG----NGLAEVHATDN |
10 | 3eqnA | 0.05 | 0.05 | 0.86 | 0.83 | DEthreader | | FDTYIVTDTIQIPTQIVGEVWSVIMGTKVIQVGA-GS-----S-G-VVEITDMIFTTRGPA--------------A-GAIIVEWNVHDPAAGAWDTHLIIGTAQSGLQVGQCPTSG-CFADLGLHLTGSSAYLEGMWVWLADHDLDSGGSQQISASEYQYFLKNAAHI-TETPYY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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