Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ASTVIYTDTSHPPLNADQNVQVVYLDKPEQLQSQLFSKLSADPQQAVKQARQILQSPSWHQQERHISQAYQGLLNAWTLGLKKFPAVVFDDDYVVYGTTDVRHARLLWETYQQ |
1 | 4jrrA | 0.08 | 0.06 | 0.81 | 1.00 | DEthreader | | PLITEFFSYCCYDALNATHLERVPVVWDLYKATKQ-M-------------------KSEN-SPTIDMRVNSGMSLMAHYQINAVPAFVVNNKYKTDLASELFEILNYLVR-KS |
2 | 4p3yB | 0.12 | 0.10 | 0.83 | 1.00 | DEthreader | | IEVREFFWYGCFEPQWLIRFVRTPAAWEQGRFDQASAA--------------Q--KFNS-TYSAVTAKVAESNKLAQQYQLTGVPAVVVNGKYVVQ-GED-GKVTQVLNYLKK |
3 | 4p3yB | 0.13 | 0.11 | 0.84 | 1.00 | DEthreader | | IEVREFFWYCCFEPMWLIRFVRTPAAWEQGRFDQASA------------------QKFNSTYSAVTAKVAESNKLAQQYQLTGVPAVVVNGKYVVQGEDGVTQVLNYLIEKEK |
4 | 4jrrA | 0.07 | 0.06 | 0.84 | 1.00 | DEthreader | | PLITEFFSYCCYDALNATHLERVPVVWDLYKLATKQSM-----------------EIAKSAFSTIDMRVNSGMSLMAHYQINAVPAFVVNNKYKTDLASELFEILNYLV-RKS |
5 | 3gl5A | 0.17 | 0.12 | 0.71 | 0.47 | HHpred | | ----------------------RSVFNDERLVEL-AVGAGLDAEE----VRAVLADAAYA---DEVRA---DEREAAQLGATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWG |
6 | 1nhoA | 0.09 | 0.05 | 0.59 | 0.57 | DisCoVER | | VNIEVFTSPTYCPMAIEVDVEKIDIM--------------------------------------------VDR-EKAIEYGLAVPAIAINGVVRFVGAPSREELFEAINDEM- |
7 | 5cnwA | 0.19 | 0.19 | 0.98 | 0.47 | MRFsearch | | --VDIWSDIACPWCYQRDQVEVVWHSNPIAMRDGLAMKYLANTFLAHQLIHYAAEQGQGDAMKERLLRAYYDEAQAQQLGITGVPFFVLGGKYGVSGAQAPETLLGALSQVWA |
8 | 6wvsA | 0.21 | 0.20 | 0.98 | 0.69 | SPARKS-K | | -DILIVNATDEILRRLGAKQIAVVSDDWRILQEALKKGGATDVDEMLKQVEILRRLGDDWRILQEALKMLKQVEILRRLGAKQI-AVVSDDDILIVNATDVDEMLKQVEILRR |
9 | 1r4wA | 0.12 | 0.12 | 1.00 | 0.74 | MAPalign | | RVLELFYDVLLGFEVLNIKLKLRPAMRFLTAVSMVSRELITESQNILSAAEKAMATAQAKISELVKSKLRETTGAACKYGAFGLPTTVAHVTYMLFGSDRMELLAYLLGEKWM |
10 | 4k2dA | 0.08 | 0.08 | 1.00 | 0.80 | CEthreader | | VEVIEFFWYGCPHQGDKIAFKRVPVASKLFYALAALGVSEKVADFLATQGVDKKKFLDAYNSFSVQGQVKQSAELLKNYNIDGVPTIVVQGKYKTGPAYGTAQVLDFLVKQVQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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