Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | WPDDEEFRRAWLTRDQYRNARQPRLRYILEAIEQQKRTKLNEEIEIKSDLTIEHIMPQSWRANWPVEADSEADVQEKELTRETYINKLGNLTLLTHPLNVTVSNGPFSVKLPALRAQSSLALNRELSGDKVWNEAAIKQRGHDLF |
1 | 2ks9A1 | 0.03 | 0.02 | 0.71 | 0.83 | DEthreader | | SAANTVVNFTYAHNEW--YYGLFYCKFHNFFPIAAVFASIYLALLFPGYSTTETM----------------------------P-SRVV-CMIE---WP-EHPN-----EKVYH-ICVTIYWFHIFFLLPLFIQQVYLAIMWLAM |
2 | 6lodF | 0.03 | 0.03 | 0.81 | 0.83 | DEthreader | | RVIYFVLFIGMAYLLRFQSGPIVVLVMAWTFAATDWGMSLEPWFSSMYVTIALILTFGGIIALAVLKSRN--LLPF-I---------------WAVNMIHFPFLLIAIYLYLIEIVWYKIM--DL-TLIGGWLGVFAW------- |
3 | 6jdqA | 0.16 | 0.13 | 0.81 | 0.61 | HHpred | | --DREKAAAKFREYPVGEPKSKDILKLRLYEQQHGKCLYSGKEINNEGYVEIDHALPFSRT----------------------WDDSFNNKVLVLGSENQNKGNQTPYEYFNGFKETSRFPRKQRIL-LQKFDEDGFKERNLN-- |
4 | 4ogcA3 | 0.16 | 0.12 | 0.73 | 0.86 | DisCoVER | | -----EAKKIQRDYGKEGYIRGDIVRLDALELQCACL--YCGTTIGYHTCQLDHIVPQ----AG-----------------PGSNNRRGNLVAVCERCNRSKSNTPFAVWAQKCGIPHVARVVIARLRRTQE----DP------- |
5 | 6m0vA | 0.12 | 0.10 | 0.77 | 0.60 | MRFsearch | | --EKDAAMLKAANQSVFHGHKQLATKIRLWHQQDLIN--------NSNQFEVDAILPLSIT----------------------FDDSLANKVLVYATANQEKGAWSFRELKAFVRESKSNKKKEYLLTEEDISKFDVIERNLVD- |
6 | 6yx5B1 | 0.11 | 0.10 | 0.96 | 0.76 | SPARKS-K | | QKKFEEYQNKLANLEVSPWQEENGLRQIYKEMIYDAFDALG--VEMPKDMEVHFALAKTEYSDLDAKNDE--DIKKVKPVFDALNNLCNQIYPDPIGINPSRLIGTPDDLFGMLKDADVEATAMSILTSP--RYECGEELRDKIK |
7 | 2ifaB | 0.04 | 0.04 | 0.94 | 0.66 | MAPalign | | -SNFLDLQKQSIYALGKTVLSKAELVALIQNAIKQAP-----SAFNSQTSRALVLFWNKIAYSELEKVTPAEAFAGTKAKLESFAAGVGTILLFEDVVRNLEENF-PLYAENFQPWSEAHIALYAIWYNPLVRAQIPF-GSIEAA |
8 | 5axwA2 | 0.15 | 0.13 | 0.85 | 0.62 | CEthreader | | NRQTNERIEEIIRTTGKENAKYLIEKIKLHDMQEGKCLYSLEAIPNPFNYEVDHIIPRSVSFD----------------------NSFNNKVLVKQEEASKKGNRTPFQYLSSSDSKISETFKKHILNLAKGKGRISKTKKEYLL |
9 | 5vgbA | 0.13 | 0.10 | 0.79 | 0.53 | MUSTER | | RKDREKAAAKFREY--FPNFVKDILKLRLYEQQHGKKEINLGRLNEKGYVEIDHALPF--SRTWDDS--------------------FNNKVLVLGSENQNKGNQTPYEYFNGKDNSREWEFKARVETSR-------RSKKQRIL |
10 | 4ogcA | 0.18 | 0.14 | 0.79 | 1.13 | HHsearch | | NRDNQKIQRDY---GKEYISRGDIVRLDALELQGCACLYCGTTIGYH-TCQLDHIVPQAGPG----------------------SNRRGNLVAVCERCNRSKSNTPFAVWAQKC-GIPGVKEIGRVRGTPNTSSE---DLTRRLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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