Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | SKIEWTEQTWNPTTGCTKVSPGCTHCYAETMAYRLQAMGAKGYENAFKLRVIPERLNDPLKRKKPTVYFVNSMSDVFHEGVPFEYIDQIFETIAKTPHHTYQILTKRADRMAEYFANRDVPQNAWLGVSVEDKKYGVPRINYLRTVNAHIRFLSVEPLLEDVGELNLKDIHWVIVGGESGRKARPMKPEWAESIRDQCEEAGVAFFFKQWGGWGADGVKRAKKHNGRELHGRTWDQMP |
1 | 6xi9A | 0.09 | 0.08 | 0.88 | 1.17 | DEthreader | | --YFNRNFHIEPTNVCVYD---CKFCSYSR-LI--------KQKEEGW-EMSVDGMMELKKDHPVTEVHIT--GG-VVPKQNLEFYSDFFRRAKARPELHIKALTPVYYYFHDGMKYMEAGL-DSMPGGAEIFHNAEQWLDIHEQAHGMKTNATMLYGEFRVMERRQQGFQAFIPLKFRNQDPEVEDLRNYAIARIYM-DNFDHIKAYWAMI---------SRQTAQLSLNFGVDDIE |
2 | 6xi9A | 0.08 | 0.08 | 0.90 | 1.17 | DEthreader | | NTYFNRNFHIEPTNVCVYD---CKFCSYSR-IK--Q-------KEEGWEMSVDGMMEVLKYDHPVTEVHIT--GG-VVPKQNLEFYSDFFRRAKARPELHIKALTPVYYIFHDGMKYMQEAGLDSMPGGAEIFHNAEQWLDIHEQAHGMKTNATMLYGHRVHMERRQQGFQAFIPLKFRNQDPEVEDLRNYAIARIYM-DNFDHIKAYWAMI------SRQTA-QLSLNFGVDDIKPI |
3 | 4fhcA1 | 0.17 | 0.10 | 0.58 | 1.26 | HHpred | | SSKPSAEYAIPLATGCM---GHCHYCYLQTTLG---S------KPYIRVYVNLDIFAQAQKYPEITRFEAACTSDIVGIDHLTHSLKKAIEFIGATDYGRLRFVTKYEHVD-HLL-DARHNGKTRFRFSINSRYVIDGRLAAARKVAAGYKL-------------------------------------------------------------------------------------- |
4 | 4fhcA1 | 0.17 | 0.10 | 0.58 | 2.07 | HHsearch | | SSKPSAEYAIPLATGCM---GHCHYCYLQTTLGS---K------PYIRVYVNLDDIFAQAQEAEITRFEAACTSDIVGIDHLTHSLKKAIEFIGATDYGRLRFVTKYEHV-DHLLDAR-HNGKTRFRFSINSRYVIDGRLAAARKVAAGKLG-------------------------------------------------------------------------------------- |
5 | 4wcxA | 0.11 | 0.10 | 0.87 | 1.17 | DEthreader | | YRIV-IFAPLYVS-NYCVNN--CRYCGYRH--N-----------EQQRKKLTMEEVRREVEEEGHKRLAVE--AGEDPVNCPIDYIVDVIKTIYDTSIRRVNVNI-AATT-VENYKKLKVG-IGTYVLFQETYRYHLTAMDRAMEAGIDDVGLGVLYGYDYEALYHANGPHTISVPRLRPASIFIVSKDFKKLVAVIRMAVPTGMILSTRE---------KPK-FREEVISIGISQSC |
6 | 1r30B | 0.07 | 0.06 | 0.87 | 1.17 | DEthreader | | --VQVST-LLSIKTGACPE--DCKYCPQSS-YKT-G------L--EAERLMEVEQVLESARKKASTRFCMG--AA-WKN-PHERDMPYLEQMVQGKAGLEACMTL-GT-LSESQAQRLANAGLDYYNHNLDTSPTYQERLDTLEKVRGIKVCSGGIVLEDGLLLQNLTPPESVPINMLVKVANDVDFIRTIAVARIMMP--TSYVRLSAGRE--------QMNEQTQAMCFMAGANSI |
7 | 1r30B | 0.07 | 0.06 | 0.89 | 1.17 | DEthreader | | QVQVST--LLSIKTGAC-PEDC-KYCPQSS-YKTGL------E--A-ERLMEVEQVLESARKKASTRFCMG--AA-WKN-PHERDMPYLEQMVQGVAGLEACMTL-G-TLSESQAQRLANAGLDYYNHNLDTSPYYQERLDTLEKVRGIKVCSGGIVGERGLLLQLATPPESVPINMLVKVANDDVDFDFIRTIAVARIMMTSYVRLSAGRE------Q-MNEQTQAMCFMAGAFLLN |
8 | 4fhcA | 0.17 | 0.14 | 0.81 | 1.02 | HHpred | | ---PSAEYAIPLATGCM---GHCHYCYLQTTLG---SK------PYIRVYVNLDIFAQAQKAPEITRFEAACTSDIVGIDHLTHSLKKAIEFIGATDYGRLRFVTKYEHV-D-HLLDARHNGKTRFRFSINSRYVIDGRLAAARKVAAGKLGFVVAPIYRHEGWLEGMDLSDLTLIQHRFT-----K-PAKRVIEQRYPKTRLDLDKYKWGRYGI----------------------- |
9 | 4fhcA | 0.17 | 0.15 | 0.87 | 1.93 | HHsearch | | SSKPSAEYAIPLATGCM---GHCHYCYLQTTLGS---K------PYIRVYVNLDDIFAQANEAEITRFEAACTSDIVGIDHLTHSLKKAIEFIGATDYGRLRFVTKYE--HVDHLLDARHNGKTRFRFSINS-RYVDGRLAAARKVAAGKLGFVVAPIYRHEGWRGQMDLSDLTFELIQH---RFTKP-AKRVIEQRYP--KTR---LDLDETKR------KYKWGRYGIG-KYV-YR |
10 | 4wcxA1 | 0.11 | 0.10 | 0.86 | 1.17 | DEthreader | | YRIV-IFAPLYVS-NYCVN--NCRYCGYRH--N-----------EQQRKKLTMEEVRREVEEEGHKRLAVE--AGEDPVNCPIDYIVDVIKTIYDTSIRRVNVNI-AATT-VENYKKLKVG-IGTYVLFQETYRYHLTAMDRAMEAGIDDVGLGVLYGYDYEALYHANGPHTISVPRLRPASIFIVSKDFKKLVAVIRMAVPTGMILSTRE---------KPK-FREEVISIGISQI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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