Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AVGQALGKEGSMQPGDVYKVSLPRSDLQVTVGGVAVKPALALGSWVAFKKMGDTAMVMGDLVLTEDEVTPVMTKLQEGGVMQTALHNHVLHESPRVMYMHINATGDAVKIAKAIHDALS |
1 | 2zxlA | 0.09 | 0.08 | 0.87 | 1.00 | DEthreader | | SRKQLMVMSWIHCKVSLNITSISG---FLNS-TKAP-N---FVVELIQSSS---KSLVLILDLYYQALDSHRQSLLKLPVNPYVSVRSAF-----SPASMLKIDAELEEILRHVSPAAK |
2 | 1ttwA | 0.06 | 0.05 | 0.80 | 0.55 | DisCoVER | | LLEEFALEEIETNELGHGAVTI------------------DKIWVVHLAPINEKELVAFMRAGILTQLYDILRKNLPLSG-VIRCALD----KDDHWLLWSQLNINGTQLASVLTSLV- |
3 | 5eo6A | 0.12 | 0.11 | 0.88 | 1.00 | DEthreader | | EFLLDLQARFSHIIAQALGVSLVIHPNIP--------T---SHANVRLFVADPIWWFGGGFDLTVLWHQAAYDLCKPFGNVEHWCDDYEQR---GVGGLFFDLNFECFKYIQAVGNGYN |
4 | 6te9F | 0.12 | 0.11 | 0.90 | 0.70 | CEthreader | | AVAGALQAAVQQLRADAVLAALVGTAVYDAVPPGPLAGTYVSLGPEDVADASDGAVHDFVISVIKAAAAAVSDALVGADLWFLRAKARRVEKADRRIDLVFRARVEG------------ |
5 | 1jyoA | 0.13 | 0.10 | 0.80 | 0.83 | EigenThreader | | NIGEKLGLPLTFDDNNQCLLLLD------------------SDIFTSIEAKDDIWLLNGMIILSPRQIMVINGELAANNEGTLAYID------AAETLLLIHAITDLISQLESFVNQQE |
6 | 3gmgA | 0.15 | 0.09 | 0.62 | 0.30 | HHpred | | -------------------------------------------ILVGAVGATGITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDVRVGVDTWVVGVSILAIGDPPTLAAAMNIP-- |
7 | 1jyoA | 0.09 | 0.08 | 0.81 | 0.47 | MRFsearch | | -IGEKLGLPLTFDDNNQCLLLLD------------------SDIFTSIEAKDDIWLLNGMIIPLSVCGDSIWRQIMVINEGTLAYIDA----AETLLLIHAITDTNTYHIISQLESFVN |
8 | 5af2A | 0.11 | 0.08 | 0.69 | 0.37 | FFAS-3D | | -------------ADPNYFIGIQFRNIP------------------YKYDVKIPHLTFGVLHISDNMVPDVIDILKIMKMDITTSYTYMLSDG-----IYVANVSGVLSTYFKIYNVF- |
9 | 1vr8A | 0.10 | 0.09 | 0.88 | 0.73 | SPARKS-K | | HHHHPPEAYSLDTAIFVLETRDYRLSDVKEIDSYDVEK----GKVAVFETEYGPVFLYVYKG---EEAKKIWKKLNGRGKKIVAWWRKN-------WLFIVEGKNGVEEFVKHVYRVYE |
10 | 6fyeA | 0.10 | 0.07 | 0.66 | 0.72 | CNFpred | | ---------------------------------------FGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRD-ELTWALYLRLAPP-GKPVICAMSCWIGDPHEGERQLESILH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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