>PF07466 (184 residues) THVIKLQVALRGNAAVKSLQKDLNKIAERTDDSNERWYKFILTETISSLRCHKDCCISTS LTVDVKYSIDWKDHFEKISMEERSKFDEETLSNLQGIKRKKVYSKKTDGSKNEYIVLTIL VAANGILDFPQVIRSVADLETALAKLNSTPETDLWGMHVLWAPQDEDDILSAERIQKDYP YQKP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | THVIKLQVALRGNAAVKSLQKDLNKIAERTDDSNERWYKFILTETISSLRCHKDCCISTSLTVDVKYSIDWKDHFEKISMEERSKFDEETLSNLQGIKRKKVYSKKTDGSKNEYIVLTILVAANGILDFPQVIRSVADLETALAKLNSTPETDLWGMHVLWAPQDEDDILSAERIQKDYPYQKP | |||||||||||||||||||
1 | 1tofA | 0.09 | 0.04 | 0.42 | 0.68 | DisCoVER | DSKKPIVVDFTACGPCKMIA----------------------------------ETLSKVIFLKVD-VDAVAAVAEA------------------------------AGITAMPTFHVYKD-----------G------------------------KADDLV-----GASQDKLKALVAKHA- | |||||||||||||
2 | 1e3dB | 0.08 | 0.06 | 0.79 | 0.83 | DEthreader | ----------VVDPLTRIEGHRTCGVCTYTHALRNLVLGNQFMHDHLVHFLHAD--IGGTNNFM---NS-YKPGVPFDPSK-IEEHV-------------GETNPHFFMGDYSWNAETGAQVAHKKTIDPEALFSTLGRTAARGIQTLVIAQM--ADVGPTTW-----LGP--RDGVPSAAAAG | |||||||||||||
3 | 3pm9A2 | 0.10 | 0.06 | 0.61 | 0.62 | CEthreader | RAVETAFVGLQSPDDALKLLGIAQGEAAGNLTSFAETPLDFSVRHANNRDPLEARYPWYVLIELSSPRDDARAALESILERGFE--------------------------DGIVVDAAIA----------NSVQQQQAFWKLREEISPA----------------------------------- | |||||||||||||
4 | 5svaQ | 0.06 | 0.04 | 0.74 | 0.73 | EigenThreader | PLLYNSVWKPNPSYDVENV------------NSRN---------------QLVEPNRIKLSKEVKPLNFRILKSFTLNYAMTRNILH--NESCSPWSLQISDIPAAGNNRSVYVFEFQYLTIGVKFFMKHGL------------------ILELQKIWQIESRGTDYTETALMNLKKELQGYIE | |||||||||||||
5 | 5irdA | 0.14 | 0.08 | 0.58 | 0.26 | HHpred | --------------------------------------------------------------ETSAPAE---ELLADVEEAMRDVVDPELGINVVGLVYGLD--V-QDGDEGTVALIDMTLTSAACP-LTDVI--EDQSRSALVGSGL---VDDIRINWVWNPPWGPDKITEDGREQ-LRAL-- | |||||||||||||
6 | 2w8oA | 0.13 | 0.11 | 0.83 | 0.42 | MRFsearch | --AALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILEWFSEEARRVYGDIIHTP--------------AKDRRALVLKQPIGVAAVI-----FPSAMITRKVGAALAA-------GCTVVVKPAED-TPFSALALAELASQ--- | |||||||||||||
7 | 2ehjA | 0.10 | 0.09 | 0.84 | 0.58 | FFAS-3D | ------KIVEVKHPLVKHKLGLMRE-----QDISTKRFRELASEVGSLLTYEATADLEGPVEIDQIKGKKITRAGLGMMDGVLENVPSARIRNEETLEPVPYFQKLVSNIDERMALIVDPMLATG-----------GSVIATIDLLKKAGCSSIKVLVLVAAPE------GIAALEKAHPDV-- | |||||||||||||
8 | 3rpeA | 0.12 | 0.11 | 0.92 | 0.59 | SPARKS-K | SNVLIINAMKSKGALNLTLTNVAADFLRESGHQVDQGYDI--ESEIENYLWA-DTIIYQMPAWWMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKT-----YMLSVTWNAPQFFGVGVDGVLPFHKANQFLGMKPLPTF----MCNDVIKQPDI---EGDIARYRQHLA | |||||||||||||
9 | 1gqnA | 0.14 | 0.10 | 0.74 | 0.60 | CNFpred | FDILEWRVDHFMIASTQSVLTAARVIRDAMPDITTQHYLTLNRAAIDSG-----LVDMIDLELF-----TGDADVKATVDYAHAH--------------------------NVYVVMSNHDFH--------QTPSAEEMVSRLRKMQAL---GADIPKIAVMPQSKHDVLTLLTATLEMQQHYA | |||||||||||||
10 | 5aa5C | 0.05 | 0.04 | 0.83 | 0.83 | DEthreader | ----------WDPIIVGSLICGICGDNHATVYDINLGEAAEYMFDHNIFQLVGD-VGRRILL------KWGRGTPTDLVDINLNIRIL----------PWNQTTLPRPNYTWVMSDTGARLTVDKSVWKIPMWSNAIERDRARTYFQAYAAALYFFHEGVPPTPW--ASPRGTPGP-EDA--NT | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |