>PF07424 (151 residues) VLTGDTRLACEATLCLATSTRPSECSPSLSRYFSIHKRKWSDTVRARANFLSLCPVSDQT PEMRSLVNAMANGAGRCDAASLNVTLLVWNSWDADGGRVLINNQMPGYCAAYTGHQYTDL GDLAPRYVGTPERGGYWVDARDYNAAVARYN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VLTGDTRLACEATLCLATSTRPSECSPSLSRYFSIHKRKWSDTVRARANFLSLCPVSDQTPEMRSLVNAMANGAGRCDAASLNVTLLVWNSWDADGGRVLINNQMPGYCAAYTGHQYTDLGDLAPRYVGTPERGGYWVDARDYNAAVARYN | |||||||||||||||||||
1 | 3wkyA | 0.08 | 0.07 | 0.88 | 0.83 | DEthreader | RQLFYLPYE-EGIPFFAFNQHSANAVFLAALYHTYYERKDLSPGDT-PPLPTVLDRFVPYWEMNLNSFHWH-WHLSNPYYIEPGRRGEVRLTDNPYGINLASPGNHNLGHMV-AVRDFFRWHKFID-----------NVFHRYKLTQP--- | |||||||||||||
2 | 1vt4I3 | 0.07 | 0.07 | 0.98 | 0.77 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
3 | 2ayiA | 0.07 | 0.07 | 0.96 | 0.55 | EigenThreader | EKLAELAIRVGLTAPIEAVDFVRLLAEKAYREMARAFREGKPALEAITETNWTIVAHPGWARAVFAVRRLWEAIFQATPPTEEVFTAPHRTDEGARRLGEVAPADNPIAKTGLVFFDTLFDENAASHIQAYQENGGWMIG--SEEM----D | |||||||||||||
4 | 1vt4I3 | 0.13 | 0.10 | 0.74 | 0.33 | HHpred | -------------------------PPYLDQYFYSHIKNIEHPERMTLFRMV-----F--LDFRFLEQKIRHTAWNASGSILNTLQQLKFYICDPKYERLVNAILDFLPKIEENLICSKYT--DLLRIALMA-----EDEAIFEEAHKQVQ | |||||||||||||
5 | 6gym1 | 0.23 | 0.14 | 0.61 | 0.48 | MRFsearch | ---IDLLESCRMLH--------TTCCEFLKHFYIHFEQKQASTVKKLYNHLKDC-----IEKLNELFQDVLNGDGES---------------------------MSNTCTAYLKP----------VLNS------ITLATHKYDEYFNEYN | |||||||||||||
6 | 6rwvA1 | 0.12 | 0.10 | 0.82 | 0.40 | FFAS-3D | -----------GLLVMAYGYKDEDIERYYTDIRHGHKPSEEMIADLRGRYHAI----GGLSPLAKITEAQ--------AYGLEKALNDSQDEVEFKAYIGLKHIEPDAVEAMHKDGIEEA----ISIVLAPHYSSFSVENKRAKEAADKLG | |||||||||||||
7 | 6ltpA4 | 0.14 | 0.13 | 0.88 | 0.67 | SPARKS-K | QDPLVHRNPDKAMKCRWAAIPVKDIGRKLSQNLRAKNIGTEYYHQGVKEFLSHYE-------LQDLEEELLKWRSNIPCWVLQNRLAEKLG--NKEAVVYIPVR---------GGRYFATHKVAAVSIVFDQKQVWVCNADHVAAANIALT | |||||||||||||
8 | 4p6zB | 0.13 | 0.07 | 0.51 | 0.56 | CNFpred | -----KLEKLDIMIRLASQANIAQVLAELKEYATE---VDVDFVRKAVRAIGRCAIK--EQSAERCVSTLLDLI--TKVNYVVQEAIVV-------------------------------------------------------------- | |||||||||||||
9 | 4akkA | 0.05 | 0.04 | 0.87 | 0.83 | DEthreader | QQLHQLAQQGTLAGQISAHMVQTRFYAALEPARALCWACA--LLNIVPQLNDSID-DPQIAGRMVALYSF--MQGKELAGQERALGAGFAR-----GQFSLRLVRIDGQQPCFDFQAQTFAECQASIELETALWFCQQRLEQ--------- | |||||||||||||
10 | 5mqfM | 0.12 | 0.12 | 1.00 | 0.55 | MUSTER | FLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |