>PF07416 (227 residues) MNNFPEIFDDESTCDYDKEIDHQELSDTFWCLMDFISSKHGKSVADINSGMNTLINIRKS LNGSGKVVSITDSYNKTYFHSQRGLTNVDSRINIDILKIDFISIIDDLQIIFRGLIYKDK GFLDSADLLDLDKKTTTRKFQEYFNILKIKIIEKIGMTKTFHFNIDFRNTISPLDKQRKC SISSSHKKTNRLNDLNNYITYLNDNIVLTFRWKGVGFGGLSLNDIKI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | MNNFPEIFDDESTCDYDKEIDHQELSDTFWCLMDFISSKHGKSVADINSGMNTLINIRKSLNGSGKVVSITDSYNKTYFHSQRGLTNVDSRINIDILKIDFISIIDDLQIIFRGLIYKDKGFLDSADLLDLDKKTTTRKFQEYFNILKIKIIEKIGMTKTFHFNIDFRNTISPLDKQRKCSISSSHKKTNRLNDLNNYITYLNDNIVLTFRWKGVGFGGLSLNDIKI | |||||||||||||||||||
1 | 4txgA1 | 0.09 | 0.07 | 0.75 | 0.67 | DisCoVER | ANRRI-IG-----------------------YFTSWRTSPAYLASDIPSKLTHINYAFAHVDGSNKLSLISVGGWAETGGYFDVASGGFVDIDFETAAFVNVMSY--DL-HG-----------------A------------WNRFVGPNAALSRVNMGVPYYTRGWKNVGLSSVGGDGAVDNIWPGGSNPMWHAKAPWLWNAKKVFLSTEDKVGGVMFWELAGDY- | |||||||||||||
2 | 3irhC | 0.04 | 0.03 | 0.69 | 0.83 | DEthreader | LEKVILDLINSAVQRLRRIKQLRFHSLGVYEITRRICEIFRSWNDDERLILCAALLHDVGHGHEAITVIIYLVSADFPE---------K---VASVIQYPNPQVQMISIDARMDYLLRDYFTTYGTFYIVSRYQMYVQVYFH----------------------LPYD-FY--R-----P-N-------KDR-HRTQIEELASVALA-------------------- | |||||||||||||
3 | 1s1dA | 0.12 | 0.12 | 1.00 | 0.61 | CEthreader | RTPAGIRYRIAVIADLDTESRAQEENTWFSYLKKTLSDSGDKVAVEWDKDHGVLESHLAEKGRGMELSDLIVFNGKLYSVDDRTGVVYQIEGSKAVPWVILSDGDGTVEKGFKAEWLAVKDERLYVGGLGKEWTTTTGDVVNE-NPEWVKVVGYKGSVDHENWVSNYNALRAAAGIQPPGYLSDTLQRWFFLPRRASQERYSEKDDERLLLSASPDFGDIAVSHVGA | |||||||||||||
4 | 4txgA1 | 0.06 | 0.06 | 0.93 | 0.53 | EigenThreader | DMSWPGVAGAEMDASLPYKGHFNLLTQYKRKYFYSMTVNGTVNQAGINAFSDSAVAFLRKYG--FDGVDIDFEYLRDRLDRAAAQDGRYYQITAAVPAFVNVMSY---------DLHGAWNRFVG--PNAALYDDGKDAELAFWYLNTDWAYHYYRVNMGVPYGWKNVGSSVGSECGDGAVGIDNIWPGGSNHAKNLEKGYNGALAAPWLWNA---GKKVFLSTEDE | |||||||||||||
5 | 3cinA | 0.15 | 0.11 | 0.73 | 0.36 | HHpred | ---------------------------------NLPIEAEGLED--SMTLKEAVDTLVKEWTELDVIVNTCEAFVPF--GNKEAIENNKERLTALRGGAAFVNVIPAFVELAKNLVVF-----------GDDGATFTADVLSHLAQR------NRYVKDVAQFNIDFLALTDDGKNKSK-----EFTKSSIVKDILGYLEPLGDKKFIAIHIEYVSFNGATDE-LM- | |||||||||||||
6 | 2pffB | 0.15 | 0.10 | 0.67 | 0.57 | MRFsearch | --------------------YFEELRDLYQTYHVLVGDLIKFSAETLSELFTQGLNILEWLE------------DKDYLLSI-----PISCPLIGVIQLAHYVVTAKLLGELRSYLKGAQGLVTAVAIAE------TDSWESFFVSVRKAI------TVLFFIGVRCYEASPMLSISN-----------LTQEQVQDYVNKTNKQVEISLV---------------- | |||||||||||||
7 | 5zw3A | 0.14 | 0.10 | 0.70 | 0.36 | FFAS-3D | -------------------------KAGMEVLLQILSVKQPKKILEIGTAIGSAIRMALELPS-AEIYTIERNEKRH-EEAVNNIKEFQLDDRIHVFYGDALELADAVH---------VTAPYDVI-FIDAAKGQYQNFFHLYEPMLSPDGV-------IITDNVLFKGLV-----------AEDYSKVAKIDEYNHWLMNVGDGLAISKKKR-------------- | |||||||||||||
8 | 6w5cA | 0.14 | 0.14 | 0.94 | 0.65 | SPARKS-K | NTYCEEVGKEAKTPLRKDDIAVDKIIDGITFLSKKHKVEKQKINPVIQKYPS--FNFGN---NSKLLGKIISPKDKLKHNLKCNRNQVDNYIWIEIKVLNHHYALSSTRFLEEVYYPATGKPALSAEQIEQIRSAPVGLRKVKKRQMRLEAARQYTWGKDFNINICKRG--------NNFEVTLATKKKKKEKNYKVVLGYDRKNTYAAIEAHANGDGVIDYNDLPV | |||||||||||||
9 | 4bj6A | 0.18 | 0.11 | 0.59 | 0.64 | CNFpred | ---------------------LQELGTNYLSIS-------------YVPSLSKFLSKNLRS--KNCIVFFDKVHIHQYAGIDRAVSETLSLVDINVVIIE---MNDYLMK---------------SDLM---------------MMVMRKINNDESIDHIVYFKFEQLDKLST-----STIIEPS-----KLTEFINVLSVLENNIAFKVLIYS------------- | |||||||||||||
10 | 2fhfA | 0.07 | 0.05 | 0.78 | 0.83 | DEthreader | MPHAQKTKADL--------A-KMTIHESHHIEL-LPVFDLEPFHYTVPDVVYNH------------ATDSPEFAKADSLAVWTTDYKIDGAWKIYFFGEGGTFS-DRLRDAVRGGG-----GDALRQNQTTLSDDQARHLADLTRLGMAGGQGITLVRVDFRNQTGLNAA-ESR--TLQFATSL-QLSAIQQAA-VQVSVTL-A---VAVLEL-------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |